Oncorhynchus tshawytscha (Chinook salmon): 112228976
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Entry
112228976 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 15 isoform X1
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112228976
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112228976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
PH
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
112228976
NCBI-ProteinID:
XP_024250567
LinkDB
All DBs
Position
LG30:4479105..4514089
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AA seq
1124 aa
AA seq
DB search
MIVSRLQPRSVIPPKPSNLKSLGPNIPNHFQTRNQNRPNPNQNQPPSGERSQERKQHQLL
EGKVKRIVRKFSSQENEVMGQAGLETRTGVEAGAETVTGAKQGDCGVVGWTRTRTEAGQQ
ADSNRGQARAQQANYDAIIMSPVELSLIPPPVPLRKPRSGPHTQPTAQPTAQSDAVPLGQ
KTDNHLGTLLTPGHGRGNRSAPDGSEVDEAPVCVTIESRETTAPVCVTIESRQNPSGHHG
NMTQCQCICHLRRTGMKLVWVPLEEEEDNYVEVIGDEEKDKRGNEHQKRVVKEGKEEDED
DYIEVTGDGEKEKRGNQDQKRERKEVNEEMLGSFRADERGRKSQTGCQTETAAVFSEHRE
VRVHEVSENNSQRSFPSKHNTSSNAESSLALMICSQHSSYQHSTQQHSSNTKHSSHQHSS
HTRPPQHKTETYDEVTYEAMPMSDREEPHPPPLPRLMKPPLMHKTQHPSPPKDNLQSMST
PSLSGLLSSISKSDIQKSTPSPQTPPSISHGNPHHQPILRPLPPLPVLHDLCLLPCPIMP
RPPQLRPQIPMKPLPPNPEPSGPSCLSRHSSTDADVRDDWVTVDGEGVEEPQEQADSPRR
ISSDWGPLRLDEPLYQIYQAKSIKEAIQLQSISRSASRATVDLHMRLRGGGSLGAPKGQS
FRARNGPAEVTLWQELPVVRDSGILERLSPEELQRQESMFEVLTSEASYLHSLNVLTDHF
LMCRDLDDTLVIHDKKTLFSNILHVYEVSQRFLKDLLSRIDENILITDVCDIIHQYALYD
FSVYIDYIRNQGYQERAYSSLVQTNNPFALVMRRLEESPLCRRLPFSSFLLLPFQRITRI
KILVQNILKRTKEGTREENTASRALTSVSEIIKESNTQVGQMKQMEELIQVNNTLEFNTL
KAVPIVSKARFLEKRGELYELSKGASLFSSRLKLTPIYLFLFNDLLIITCKKSSERYMVT
DHTHRSLVQVQPAGFGAGAEDPGPKLEHSFCLLLLENHRGLACEHLLKAPSESDMHRWMA
AFPSLNDPNRKEEVVYEDWDCPQVQCVEQYVAQQADELTMEPADIINVLCKTHEGWNKGM
RLSDGEKGWFPSRSVVEITNEHRRRRNLREQYRIAQAAAKVTKN
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgtcaagacttcaacccagatccgtcattcccccaaagccttctaacctcaaa
tccttggggccaaacatcccaaaccacttccagaccagaaaccagaacagaccaaacccg
aaccagaaccaacccccatcaggggagaggagccaggagaggaaacaacatcaactactg
gaggggaaggtgaagaggattgtgcgtaagttcagcagccaggagaatgaggtgatgggg
caggcaggactagagacaagaacaggggtagaggcaggggcagagacagtgactggggca
aagcagggagactgtggggtggtggggtggacaaggacaaggacagaggcaggacagcag
gcagacagtaacagaggacaggcaagggcccagcaggccaactatgatgctataataatg
agccctgtggaactcagcctcataccacctccagtaccattgagaaagccacgttctggc
cctcacacacaacctacagcacaacccacagcacagagtgatgccgtgcccctggggcag
aagacagacaaccatctgggcacccttctcacacctggacatggacgaggaaacagatca
gctcccgatggaagtgaggtggatgaagcgcctgtgtgtgttaccattgagagcagagaa
accacagcgcctgtgtgtgttaccattgagagcagacaaaaccctagtggtcatcatggc
aacatgacacagtgccagtgcatctgtcacctgaggagaactggcatgaagttagtctgg
gttcctctggaggaagaggaagataactatgtagaggtgataggggatgaagaaaaagac
aaacgagggaatgagcaccagaagagagtggtgaaggaggggaaggaagaggatgaagat
gactacatagaagtgacaggggatggagagaaagaaaaacgagggaatcaggaccagaag
agagagaggaaggaggtgaatgaagagatgttgggatctttcagagcagatgagcgaggg
aggaaaagtcagacagggtgccagacagagacagctgctgtgttcagtgagcacagagag
gtcagagttcacgaggtcagcgagaataacagccagagatccttcccttcaaaacataac
acatcatccaacgcagaatcttccctggccctgatgatctgctcacagcacagctcatat
cagcatagtacacaacagcacagctcaaacaccaagcacagctcacaccagcacagctca
cacaccagaccccctcaacacaaaactgagacatatgatgaggttacatatgaggccatg
cccatgtctgacagagaagaaccacatccacccccactcccacgcctaatgaaacctcca
ctgatgcacaagacgcagcatccctctcctccaaaagataatctccagagcatgtccacg
ccctctctctctggcctactaagctcaatttcaaagtcagacatccagaagagtacccct
tcccctcagactcctccctccatctcccatggcaacccccatcatcagccaatcctgcga
cctctgcctccacttcctgttttacatgatctctgccttctcccctgccccatcatgccc
cgccctcctcaactcagacctcagattccaatgaaacctcttccacctaaccctgagccc
agtggccctagctgtctcagccgacactcatccacagatgctgatgttagggatgactgg
gtgactgtagacggggagggcgtagaggagccacaggaacaggcagatagtcccaggagg
atctcctcagactggggacctttgaggctggacgaacctctgtaccagatctaccaggct
aagtccatcaaggaggcgatccagctccagagcatcagccggagtgccagcagggccacc
gtggacctccatatgaggctcaggggcggtgggtccttaggggcccctaagggccagtcc
ttcagggccaggaatggccccgcagaggtcacactgtggcaggagctaccagtggtcaga
gacagtgggatcctggagagactcagtccagaggagctgcagagacaggagagcatgttt
gaagtattgacatcggaagcctcgtacctccactcactgaacgttctcactgatcacttc
ctgatgtgtcgggaccttgatgacacactggtgatccatgacaagaagaccctcttctcc
aacatactccatgtgtatgaggtcagccagaggttcttgaaggatcttctgagtaggatc
gatgagaacattctgataactgatgtgtgtgacatcatccaccaatatgccctgtacgac
ttctcagtctacattgattacatccgtaaccagggttaccaggagagggcctacagctcc
ctcgtgcagaccaacaacccatttgcgttggtgatgcggaggctggaggagtctcctcta
tgtcgtcgtcttcccttctcctcctttctgctccttcctttccagaggatcacacgcatc
aagatccttgtacagaacatcctgaagaggactaaagagggcactagggaggagaacact
gcctctagagccctgacctcagtgtctgagatcatcaaggagtccaacacacaggtgggc
cagatgaagcagatggaggaactcatacaagtcaataacacattggagttcaacacactc
aaggctgttcccattgtctcgaaggctcgcttcctggagaagagaggagagctatatgag
ctatccaaaggggcctccctcttcagttctcgtctcaaactcacccccatctacctcttc
ctcttcaatgacctactcatcatcacatgcaaaaagagctcagagcgctatatggtgaca
gaccacacccaccgctccctggtgcaggtccagcccgcggggtttggggctggagcggag
gacccagggcccaagttggagcactccttctgtctgctactgctggaaaaccaccgaggc
ttggcctgtgaacacctgctgaaggccccctcagagtcagatatgcaccggtggatggca
gcattcccttccctaaatgacccaaacagaaaggaagaggtggtttatgaggactgggat
tgcccccaggtgcagtgtgtggaacaatacgttgcccagcaggctgatgagctcaccatg
gagcctgctgacattatcaacgtgctatgcaagacccatgagggttggaataaggggatg
cgtctgtctgacggagagaagggttggttccctagcagaagcgtggtggagataaccaac
gagcatcggaggagacggaaccttcgggagcagtaccgcatcgctcaagctgcagctaaa
gtcacaaagaactga
DBGET
integrated database retrieval system
