Oncorhynchus tshawytscha (Chinook salmon): 112228984
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Entry
112228984 CDS
T05605
Symbol
abcg4a
Name
(RefSeq) ATP-binding cassette sub-family G member 4
KO
K05680
ATP-binding cassette, subfamily G (WHITE), member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112228984 (abcg4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112228984 (abcg4a)
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG1, 4 subgroups
112228984 (abcg4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
SMC_N
RsgA_GTPase
AAA_13
AAA_16
MMR_HSR1
AAA_29
Rad17
nSTAND1
AAA_18
AAA_28
AAA_22
cobW
MeaB
ABC2_membrane_3
AAA_23
DUF1440
Motif
Other DBs
NCBI-GeneID:
112228984
NCBI-ProteinID:
XP_024250581
UniProt:
A0A8C8EWA9
LinkDB
All DBs
Position
LG30:4108645..4152994
Genome browser
AA seq
669 aa
AA seq
DB search
MGTECSIVGQVNTQEKSVSMAERTLETSVSVSIPMEETKLPGGVGVPTEAPLLTHLKKVE
NHITEAQRFSHLPRRSAVDIEFTELSYTIREGPCWRRRGYKALLKCLSGRFCSRELIGIM
GPSGAGKSTLMNILAGYRETGMKGQILVNGRPRDLRSFRKMSCYIMQDDMLLPNLTTREA
MMVAANLKMKESMEVKKELVDEILTALGLQECAQTRTISLSGGQCKRLAIAQELVNNPPV
MFFDEPTSGLDSASCFQVVSLMKSLAQGGRTIICTIHQPSAKLFEMFDKLYILSQGQCIY
HGTVPYLIPYLKNLGLHCPTYHNPADFIIEVASGEYGDLNSVLFEAVQGGLCSEEGKKNS
SDKSDPASSGHSNSHSDTQYTGTMEKHSFATSTWSQFCVLFRRTLLTICRDTVLTHLRVM
SHICIGILIGLLYLNIGNDASKVFNNTGFLFFSMLFLMFAALMPTVLTFPLEMSVFLREH
LNYWYSLKAYFLAKTMADIPFQVICPIMYCSIVYWMTEQPPEAVRYLLFMALSTSTALVA
QSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVNFDTIPKYLQWSSYVSYVRYGFEG
VILSIYGMNRSELECPGVVCKFQKPEEVLQLLDVEDAKLYVDFLVLGVFFLVLRLATYLV
LKYKVIAER
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggaacggagtgctctattgttggtcaagtcaacactcaagaaaaatctgttagtatg
gctgagaggacgttagagacgtctgtctctgtcagcatccccatggaggagaccaaactc
cctgggggtgtgggtgtgcccacggaggccccgctgctcacccacctaaagaaagtggag
aaccacattacggaggcccagcggttctcccacctgcctcggcgctctgctgtggacata
gagttcactgagctgtcgtacaccatcagagagggcccctgctggaggaggagaggttac
aaggccctgttaaagtgtctgtcaggaaggttctgtagcagggagctcatcggcatcatg
gggccgtcaggggctggcaagtccactctgatgaacatcctggctgggtacagagagacg
gggatgaagggtcagatcctggtgaacgggcggccgagggatttgcgtagcttcaggaag
atgtcttgttacatcatgcaggacgacatgctgctgccaaacctcaccacgcgggaggcc
atgatggtggctgccaatctgaagatgaaagagagcatggaagtgaaaaaggaattggta
gatgagatcctgacggccctgggactgcaggagtgtgcccagacccgcaccatctctctg
tctggtgggcagtgcaagagactggccatcgcccaggagctggtcaacaatccccctgtc
atgttctttgatgagcctaccagtggtctggacagcgcatcctgtttccaggtggtctct
ctcatgaagtccttggctcagggagggaggacaatcatctgcaccatccaccagcccagc
gccaagctctttgagatgtttgataagctttacatcctcagtcagggccagtgtatatac
catggcactgtcccttacctcatcccttacctgaagaacctgggccttcactgtcctacc
taccacaaccctgcagacttcattattgaggtggcctctggggagtatggggacctgaac
tctgtgctgtttgaggctgtgcagggaggactctgctcagaagagggcaagaagaactcc
agcgacaagagtgacccagcctcatctggccactctaacagtcacagcgatacacagtac
acaggaacgatggagaaacacagctttgccaccagtacctggtcacagttctgcgttctg
ttcagaagaacactattaacgatatgcagggatacggtgttaacccacctcagagtgatg
tcccacatatgtataggaattctgatcggtctgctctatctcaacattggcaatgatgcc
agcaaggtcttcaacaacactggcttcctcttcttctccatgcttttcctcatgttcgct
gccctgatgcccaccgtcctcacctttcctctggagatgtcagtgtttctgagggaacat
ctcaactactggtacagcctgaaagcctacttcctggccaaaaccatggcggacataccc
ttccaggtgatctgtcccatcatgtactgcagtatagtgtactggatgacagagcagcct
cctgaggcagtgcggtacctgctcttcatggccttgtccacctctaccgccttggtagcc
cagtccctaggcctcctcattggggccgcctccacctccttacaggtggcgaccttcgtg
ggcccagtcacagccatcccagtgctcctgttctctggattctttgtcaactttgacacc
atccccaagtacctgcaatggagctcatatgtgtcctatgtcaggtatggctttgagggg
gtgatcctgtccatctatgggatgaatcgttcggagctggagtgtcctggggtggtgtgt
aagttccagaagcccgaggaggttctacagctactggacgtggaggatgctaagctctat
gtggacttcctggttctgggtgtgttcttcctggtcctcagactggctacatacctggtg
ctcaaatacaaagtcatagcagagcgataa
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