Oncorhynchus tshawytscha (Chinook salmon): 112229010
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Entry
112229010 CDS
T05605
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112229010
03012 Translation factors [BR:
otw03012
]
112229010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112229010
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112229010
mRNA cycle factors
Stress granule specific factors
112229010
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
112229010
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112229010
Exosomal proteins of bladder cancer cells
112229010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_30
UvrD-helicase
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
112229010
NCBI-ProteinID:
XP_042165081
LinkDB
All DBs
Position
LG30:2193495..2226984
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AA seq
409 aa
AA seq
DB search
MSADYEERDLSNRDNGPEGMEPDGIIESNWNEIVDSFDEMALRETLLRGIYAYGFEKPSA
IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDIELKGTQALVLAPTRELAQQIQ
KVILALGDYMGASCHACIGGTNVRNEVTKLQAEAPNIVVGTPGRVFDMLNRKFLSAKYIK
MFVLDEADEMLSRGFKDQIYEIFQKLGTSTQVVLLSATMPQDVLEVTKKFMRDPIRILVK
KEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDF
TVSALHGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYI
HRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagattatgaagagagagacctctccaacagagacaatggcccagagggcatg
gagccagatggcatcattgagagtaactggaatgagatcgtggacagcttcgatgagatg
gccctgcgtgagactctcctgagaggaatctatgcctatggttttgagaaaccatctgcc
attcagcagagggccatcctcccttgtatcaagggttatgatgtcattgcacaggcccag
tcaggcacagggaagactgccacgttcgccatctccatcctccagcagattgatatcgag
ctgaagggcacccaggccttggtcctcgctcccacccgagagctggctcagcagatccag
aaggtgatcctggccctcggtgactacatgggagcctcctgccatgcctgtattggcggc
acaaacgtccgtaacgaggtgacaaagctccaggctgaggctccgaacatagtggttgga
acgccaggccgcgtgtttgacatgttgaaccgcaagttcctctctgctaagtacatcaag
atgtttgtcctggatgaggctgatgagatgttgagccggggtttcaaggaccagatctat
gagattttccagaagctcggcaccagcacacaggtggtgctcctgtctgctaccatgcct
caggatgtgctggaagtcaccaagaagttcatgcgtgacccaatccgtatccttgtgaag
aaggaggagctcaccctggagggtattcgccagttctacattaacgtggagaaagaggag
tggaagctggacaccctgtgtgatctgtacgagaccctgaccatcacccaggctgtgatc
ttcatcaacacccgcaggaaggtggactggctgactgagaagatgcatgccagggacttt
actgtctctgccctgcacggtgacatggaccagaaggagagggacctgatcatgagggag
ttccgctctggctccagccgtgttctcatcaccacagatctgctggcccgaggaattgat
gttcagcaggtgtctctggttatcaactatgacctgccaaccaaccgtgagaactacatt
cacaggatcgggagaggaggccgttttggcagaaagggtgttgccatcaacatggtgaca
gaggaggacaagcgcactctccgggacattgagacgttctacaacaccacagtagaagag
atgcccatgaatgtggctgacctgatctag
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