Oncorhynchus tshawytscha (Chinook salmon): 112229022
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Entry
112229022 CDS
T05605
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03272
Virion - Hepatitis viruses
otw04382
Cornified envelope formation
otw04514
Cell adhesion molecule (CAM) interaction
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
112229022
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112229022
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112229022
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112229022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112229022
04147 Exosome [BR:
otw04147
]
112229022
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112229022
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112229022
Exosomal proteins of colorectal cancer cells
112229022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Motif
Other DBs
NCBI-GeneID:
112229022
NCBI-ProteinID:
XP_024250664
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All DBs
Position
LG30:complement(1694067..1715294)
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AA seq
379 aa
AA seq
DB search
MASFALELVGVSLSVLGWILSVVSCALPMWRVSAFIGANIVTAQVYWEGLWMSCVVQSTG
QMQCKVYDSMLALPQDLQAARALSVATIILGVLALLVVTIGAKCTNCIEEEGVKAKVVLS
AGAAFILVSLVQLVPVSWSAHIIILEFYNPIIPSAQKMEIGAAMSMGMEIVGIALGVIGF
ILGIVVCALPLWKVTAYIGANIITSQTIWEGLWMNCVIQSTGQMQCKVYDSLLALPQDLQ
AARAMTIIAIILGILGVMVSIVGAKCTNCIDDEPSKAKVMIISGIFFILAGILVLIPVSW
SASTIIQDFYSPLLINAQKRELGASLYIGWGAAALLLIGGAMLCSSCPPREEKRYKPPGM
AYSAPHSGCAAGYVRKDYV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcattcgctctggagctagtgggtgtgagcctgtccgtgctgggctggatactg
agcgtagtgagctgtgctctgcccatgtggagggtctcagccttcatcggagccaacatc
gtcacagcccaggtctactgggaaggtttatggatgagctgtgtggttcagagcacaggc
cagatgcagtgtaaggtttacgactccatgctggccttgccccaggacctgcaggctgcc
agagctctctctgtggccaccatcatcctgggggtcttagctctcctcgtggtgaccatc
ggagccaagtgtaccaactgcatcgaggaggagggagtgaaggccaaggtggtgttgtcc
gccggagctgcctttatcctagtttcgctggtccagctggtgcctgtgtcctggtcagcc
cacatcatcatcctggagttctacaaccctatcatcccctcggcacagaagatggagatc
ggggcagccatgtcgatgggcatggagattgtggggattgccctgggcgtcataggattc
atcctgggcatcgtggtctgtgctttgcccttgtggaaggtgacagcctatatcggagcc
aacattatcacatcccagaccatatgggagggcctgtggatgaactgtgtaatccagagt
acgggacagatgcagtgtaaggtctacgactccctcctggccttgccccaggacctgcag
gccgccagagccatgacaatcatcgcaatcatcctggggattctaggggtgatggtctcc
atcgtcggagccaagtgcaccaactgcatcgatgatgaaccctccaaagctaaagtcatg
atcatctccggaattttcttcatcctggccgggatcctagttctcatccctgtctcctgg
tcggccagcaccatcatccaagacttctacagcccccttctgatcaacgcacagaagagg
gagctgggggcctctctctacattggctggggggctgcagccctgctactgatcggaggg
gccatgctgtgcagctcctgcccccccagggaggagaagaggtacaagccccccggcatg
gcctactccgcccctcacagcgggtgcgcagcgggatacgtcaggaaggactacgtctga
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