Oncorhynchus tshawytscha (Chinook salmon): 112229047
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Entry
112229047 CDS
T05605
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112229047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229047
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112229047
Endosome - Golgi transport
Arf GTPase associated proteins
112229047
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112229047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
PH
PH_6
Motif
Other DBs
NCBI-GeneID:
112229047
NCBI-ProteinID:
XP_024250700
LinkDB
All DBs
Position
LG30:502970..512438
Genome browser
AA seq
1021 aa
AA seq
DB search
MSVPLGPDMPVPVPKPRARYKRAGGSLQSQLSSERDFLCDTTDPAASTGNPSKGVPPTND
LLVESEDNHAIILNKPPFSPAIPSPANENQSQHNFPLSRSDSGVTLSCPLLGSKDPDGLH
NRSAWSSTPPYSSAADYDPDITVVADWAKDLGSESSNDDDAVTGEMKNPSQMNNVVSRQV
GVVPNGETPQPPVEQASMQTRPIKQKTPRAATIRVSRRKQAAVSGGGAQIAESSRRESVV
SRSSWLDVWKGRRHNVLWATLDGQLVSLWKKRTDKFTDIVFHVSSITDVRKQEKGRFSVY
FSKKHFEFMAHNKEVQEGWVTSILASRGREPPVPPEQHGALTMKGPRNNRVYAAICGHNL
WIYNNKEDFQLGVGMTFVSMNVASVKQTGRHSFSLITPYKTFNFSTDSLRELGVWLESLT
QVIRCALSCSEVAERLWASPWNKVCADCGCANPEWASVNLLVVICEACAGQHRSLGMHVS
KVRSLKLDIKVWTEPLILLFVHYGNKAANDVWAHNVPGAEQILPDSSVDQRGEFIRAKYT
KGRYRRTHPLASSQNLLNKRLCEIVCGPNVPETMSLLCSGARVLCHSGDPHCSSPISLAE
RAGQAMQTELLRHNEYTEPPAYAHQKPSRDPATSVPLSAAAGEELHGKLEEDRFLFSQEN
DSAACDVLDLREVISIFDCSNGPTHAFEMVTLTDQLLCSSDTEDGLLIHLLHILKVVLPG
PIEEELDRGFAMSRVSLREGGGLQHNEVWAVLRGGQVLIYPTDQQRHREMLTLNLETQYK
IDSSENTIELVTGERTMSMQFERDHSCQSWHSLLKRAVSTERKLYQLPPNAIGNVPPAIE
RCISHITQYGLKVDGLYRRCGLATKISCLVEALSSSPTTTPLETDEEGLLDAAGALKQYV
RQQVVLIPETHRKLWVEAAAHTEETFRLTTYRRLLKKLPPDNRITLNALCGHFYIVQQYS
AENRMTAQNLALVFVPTLFQELAMNTDMVQLTRELIIHYTLLFLGKEEESDMESEELITK
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccccctcggtccagacatgcctgtgccagtacctaaaccacgggcacggtac
aagcgggctggtgggagcttacagagccagctctcttctgagagggattttctatgtgat
acaactgacccagcggcaagtacaggaaatcctagcaaaggtgttccacccacaaatgat
ttgctggtagaaagtgaagacaaccatgccattatcctaaataaacctccgttcagccct
gctatccccagcccggctaatgagaatcaaagccagcataacttccctctctccagatct
gattctggagtgactctgtcttgcccattactgggcagtaaggatccagatggactccac
aacagatctgcctggtcatccacccctccatacagttctgctgcagattatgaccccgat
atcactgtagtagctgactgggcaaaagaccttggatcggaatcttccaatgacgatgat
gccgttactggagaaatgaagaacccatctcagatgaacaatgtggtgtcaaggcaggtt
ggtgttgtccccaatggagaaacccctcagcctcctgtggaacaggcgtctatgcagacc
agaccaatcaaacaaaagaccccacgtgctgccaccatccgcgtcagcaggagaaagcag
gcagcagtgagcggtggtggtgcccagatagcagagtcctctcgtagggagagtgttgtg
tccagatccagctggctggatgtatggaagggacgcaggcataatgttctgtgggccacc
ctggatggacagttggtatcactatggaagaaacgcacagacaagttcacagacatagtg
ttccacgtgtcaagcatcaccgacgtccgtaagcaggagaaaggacgcttctccgtttac
ttcagcaagaaacactttgagttcatggcacacaacaaagaggtgcaggagggctgggtg
acttccattctggcttctcgtgggcgagaacccccagtccctccggagcagcatggagcc
ctgaccatgaagggccctcgcaacaacagagtgtacgctgccatctgtggacacaaccta
tggatctacaacaataaagaggacttccagttgggggttgggatgacctttgtgtccatg
aacgtggcgtcagtgaagcagactggccgtcatagcttcagcctcatcacaccgtacaaa
accttcaatttctccacagactcattgagggagctgggcgtgtggctggagagcctgacc
caggtgatccgctgtgccctgtcatgcagcgaggtggccgagcgactctgggccagccca
tggaacaaagtgtgtgccgactgtggctgtgccaaccctgagtgggcctcagtcaacctg
ctggtggtcatctgtgaggcttgtgcaggccagcatcggtctttgggcatgcatgtgtcc
aaagtgagaagcctgaagttggacattaaagtgtggactgaacctctgattctgctcttt
gtccattatgggaacaaagcagccaatgatgtgtgggctcacaacgtgccgggtgcagag
cagatcctgccggactcctctgtggatcagaggggggagttcattagggccaagtacacc
aaaggtcgatacagacggacccatccgttagcctccagccagaacctgctcaacaagagg
ctgtgtgagatagtgtgtggccctaacgtcccagagaccatgtccctgctgtgctcgggg
gcgcgggtcctgtgccactcaggggaccctcattgctcatcacccatctcactggcagag
cgggctggacaggccatgcagactgagctcctcagacacaacgagtacacagagccccct
gcctatgctcatcagaagcccagcagagaccctgctacctctgtccccttgtctgctgca
gcaggagaggagctccatgggaagttggaggaggaccgcttcctgttctcccaggagaac
gactctgctgcctgtgatgttctggacctgagggaggtcatctccatcttcgactgctcc
aacggaccaactcatgcatttgagatggtgactctgacggaccagttgctgtgcagttct
gatacagaagatggtttactcatacaccttctccatattctcaaggtggtgttgcccggg
cccatagaggaggagctggacagggggtttgctatgtcccgggtgtctctgagggaggga
ggaggcctgcagcacaacgaggtctgggcagtgctccgtggaggtcaggtcctcatctat
cctactgaccagcagcgccacagagaaatgctaacactcaacctcgagacgcaatacaag
atagattcctctgagaacaccatagagctggtcactggagagagaaccatgtccatgcag
tttgaacgagaccacagctgtcagtcctggcacagcctactgaaacgggcagtgtccaca
gagaggaagctgtaccagctgccccccaacgccattggcaatgtgccccctgccatcgag
aggtgtatctcacacatcacacaatatggtttaaaggtggatgggctgtaccggcgctgt
ggcttggccacaaagatcagttgtctggtggaggccctcagcagttcacctacaactaca
cctctggagacagacgaagagggtctcctggacgctgcgggggccctgaagcagtatgtc
cgccagcaggtggtgctcatcccagaaacacacaggaaactgtgggtggaggccgcagct
cacacagaagagacctttagactgactacataccgcagactactgaagaagctgccccct
gacaacagaatcacactcaacgccctctgcggacacttctacatagttcagcagtatagt
gcagagaaccgtatgacagctcagaacctggcgctggtgtttgtccccacactattccag
gagctggccatgaacactgacatggtgcagctcaccagagagctcattatccactacaca
ctcctcttcctgggtaaagaagaggagtctgacatggagagtgaagaactaataactaag
ttatag
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