Oncorhynchus tshawytscha (Chinook salmon): 112229057
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Entry
112229057 CDS
T05605
Name
(RefSeq) cysteine protease ATG4A
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04136
Autophagy - other
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112229057
04136 Autophagy - other
112229057
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112229057
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229057
03029 Mitochondrial biogenesis [BR:
otw03029
]
112229057
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
112229057
Membrane trafficking [BR:
otw04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112229057
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112229057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
112229057
NCBI-ProteinID:
XP_024250722
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All DBs
Position
LG30:complement(102142..108702)
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AA seq
415 aa
AA seq
DB search
MEAVLAKYENQINVFSEFLEDLPDTDEPVWVLGECYNVKTEKTKLLSDVHSRLWFTYRKK
FSPIGGTGPSSDTGWGCMLRCGQMILAQALVCSQLGRAWRWRAEGGQPEEYHRILHCFLD
KKDSCYSVHQMAQMGVGEGKSVGEWYGPNTVAQVLKKLALFDDWNSLAVYVSMDNTVVIE
DIKKQCRQASRGSRLRPRPCGWGEPFASGETPEQACLHTHGNRATMCPHSQSQSRFDWRP
LLLVIPLRLGINHINPVYIQALKECFKIPQSCGVLGGKPNLAYYFIGFVGEELIYLDPHT
TQSAVESEAGSGVDDQSYHCLRSPRRMKITNLDPSVALGFFCKSEDDFDSWCNLVQQEIQ
MKRNLRMFELVENHPPHWPPFVPPTKPEVQTTGAEFIESSDKLFESEEEFEILNV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtattagccaagtatgaaaaccagataaatgtgttttctgaattccttgaa
gacttgcctgacaccgatgaacctgtgtgggttttaggagagtgttacaatgttaaaaca
gaaaagacaaaactcctatcagacgttcactcgcggctatggttcacctacaggaaaaaa
ttctctcccataggcggaacaggcccctcttcagatacaggctggggatgcatgctacgg
tgtgggcagatgattcttgcacaggccctggtctgctcacagctgggacgagcctggcgt
tggagggcagagggaggacagccagaggagtaccatcgtatcctccactgtttcctggat
aagaaagacagctgttactccgtacaccaaatggctcagatgggagtcggtgaagggaag
tctgtgggagagtggtatggcccaaacacagttgcgcaagtactcaagaaacttgcacta
tttgatgactggaattctcttgctgtgtatgtgtcaatggacaacacggtggtgatcgag
gacatcaagaagcagtgtcgccaggcaagcagagggagcagattgcggcccagaccctgt
ggctggggggaacccttcgcctctggagaaacaccagagcaagcctgtttgcacacgcac
gggaacagagccacgatgtgtccacattctcaatcccagtctcgttttgactggaggccc
ctgctgctggtcatacctctccgtttgggaatcaaccacatcaaccctgtctacatccag
gccctcaaggagtgttttaaaataccacaatcctgtggtgtgctgggaggaaagcccaat
ctggcctattacttcatcggatttgtaggagaggagctgatctacctggacccccacacc
acccagtcagccgtggagtcagaggctggcagcggagtggacgaccagagctaccactgt
ctgaggagtccacgccgcatgaagatcaccaacctggacccctctgtggccctgggattt
ttttgtaagagtgaggatgactttgacagttggtgtaacctggtccagcaggagatccag
atgaagaggaacctgcggatgtttgagctggtggagaatcacccgccccactggcccccc
ttcgttcctcccaccaaaccagaggttcagaccacaggggcagagttcatcgaatcgtcc
gacaagctgtttgagtctgaagaggagtttgagatccttaacgtgtga
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