Oncorhynchus tshawytscha (Chinook salmon): 112229077
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Entry
112229077 CDS
T05605
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
112229077
Proteoglycans [BR:
otw00535
]
Cell surface proteoglycans
Others
112229077
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Motif
Pfam:
Neural_ProG_Cyt
Motif
Other DBs
NCBI-GeneID:
112229077
NCBI-ProteinID:
XP_042167239
UniProt:
A0AAZ3NZC2
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Position
LG03:18278025..18321901
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AA seq
531 aa
AA seq
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MNGKEARFCTGCWRLLLLSSILVLHLIPLFVHGNTLGANVTELDTTANVTSLPSKVEEAA
KVNDVVTKVTWVSSSVSPIVTVTQRPGHMPRSEEEQGSGMLEEGVLPAEEEVVAPPRISP
DSAETELLLPSNPRGTEEEEDEEEHTDPPWLNARDNVFDLDRHFQEGVANLATTTAPPPA
AANPSRPDVLTVDFFDPASRGRGLDLAPPSPSSLAHELQGGDPTSWAMPDNYDYLTPYED
GASPTPDEYSYSTTTDTLDGDDDLRLTAGPPSRSRPRAPPGSGSFTPDKRLPSGGAAAAP
EGPAVAPPALPVDGSDGAGGCRQGYVKQNGTCRSPCDTLPSYCFNGGQCYLLDGMGVFCR
CNVQDYIWHKGSRCESVVTEFQVLCLTIGASALMVLLLFMIIVCFAKKLHVLKTENSKLR
KRSSKYRPPSEQHNDNFSLSTIAEGSHPNVRKLCDTPPNVPHARALAYYDNIICQDDPNA
QNKLEDPVKAPVPKEDDSLNIHNSLTPKHENHKVLGEENSSEVNSLQNNMM
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaaggaagcgaggttttgcacgggatgctggaggctactgctgctgtcaagc
attctggttctacacttgattcccctctttgtacatgggaacactctgggggccaatgtc
actgagttggacaccacagccaatgtgacatccctgcccagtaaggtcgaagaagcggcc
aaagtgaatgatgttgttaccaaggtgacctgggtcagcagctcagtcagccccatcgtc
acagtgacccagaggcccggccacatgccccgctccgaggaggagcaaggcagcggcatg
ctggaagaaggggtgttgccagccgaggaggaggtggtggccccgcccaggatcagccct
gactcagcagagacagagctcctgctgcctagcaacccccgtggcacggaggaggaagag
gatgaagaggagcacaccgacccaccgtggctgaacgccagagacaacgtcttcgacctg
gaccgccacttccaagaaggagtagccaatctggccaccaccactgcccctccacctgcc
gctgctaacccctcccgcccggacgtcctcacggtggacttcttcgaccccgcctctcgc
ggccgcggcctggacctagccccgccctctccctcctctttggcccacgagctccagggt
ggcgaccccacttcctgggccatgccagacaactacgactacctcacaccgtacgaagac
ggtgcgtcgcccacccctgatgagtactcctacagcaccactactgataccttggatggg
gatgacgacttgaggctaactgccgggcctccatcgcgctccaggcccagggctccccca
ggctccggctccttcaccccagacaagaggctgcccagtggaggtgctgctgctgctcca
gagggccctgcggtagcccctccagcgttacccgtggatggctcagacggagctggtggc
tgccgccagggctacgtgaagcagaatggaacctgccgctccccctgcgacacactgccc
agctactgcttcaacggaggccagtgctacctactggatggcatgggggtcttctgcagg
tgtaatgtccaggactacatctggcacaagggttcccgctgtgagtcggtggtgacagag
ttccaggtgctgtgtctgaccatcggggcgtcggccctcatggtgctgctgcttttcatg
atcatcgtctgcttcgccaagaagctccacgtgctcaagaccgagaacagcaagctgcgc
aaacgcagcagtaagtaccggcctccatcggagcagcacaatgataatttctccctgtcc
accatcgctgagggctcccacccaaatgtaaggaaactgtgcgacacccctcctaacgtc
cctcatgcccgtgctttggcttactatgataacattatctgtcaggatgatcctaatgcc
cagaacaagctggaggaccccgtgaaggccccggtgcccaaggaggacgactccctgaac
atccacaactccctgacccccaaacacgagaaccacaaggtactgggcgaggagaactcc
tcggaggtaaactcactgcagaacaacatgatgtag
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