Oncorhynchus tshawytscha (Chinook salmon): 112229090
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Entry
112229090 CDS
T05605
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112229090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112229090
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
112229090
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
112229090
NCBI-ProteinID:
XP_042164962
LinkDB
All DBs
Position
LG30:32179971..32194186
Genome browser
AA seq
2081 aa
AA seq
DB search
MAASAASEGSTPGFCPSYAVICSFLERYGTLLDLPELTFPQLERYLQDTISVPKILVDLH
VKLLRKIGKSVSADRWEKYLVKVCHEFNSTWAWELENKGYRDMSVEYKTGILKHLCECQF
DDNVKFKTAINEEDPDKMRLLPIGKDKDGLMYWFQLDQDKNVRVYVEEQDDLDGSSWKCI
VRDRNSLAEILALLKTQIDPALLTKKEGEEEDEAKNNTGGEGEVKKTEDTSEDEEDKPSK
GTTSLVSPKTEITEKEESQLDESEAKSSLNGLKDESESKSQSEEPMVDDKVTINTRAIKE
EPMEVSESKESTATNATEPLAEKPCLMPQTEQTDEAKRKTANELQRAMKNDQQAKIPLKK
REMKLCENVDNNSGGGSSIFVRNPSVALVKEAPEVEETSKEISDAPVGTIECISDQMNGD
AQPTTEKSINNGLRDSVDGKKQQTKAAAGEEREAAEASAKEKINLDKEKEEMASNTEVAM
ANETSLQKMVPAEKESTEDSEEVKKSALKEAKSPSPLMSKPLTSSKDATSPPEKHYDCKE
EQNIKVSKWDVKVCRTEHTTYTSIETDENPLSSKSQKPDETKGTDSSITSQEVKSAVSKE
TDKTVVNKDGYPLSVVKDMEKPPCTKGTEKWSNPKNPETSVITKQTGRPDPITEKPDHSK
CIKMPTVVKNTEKPPDKEGVEKCDVSKDIKTSVIKKTEISEKSKDAENLAISQETNTSSF
LKKADKPVSNKEAEKLESIKETDKSLVIKMTVKPEASKHTEKCDNPKDNKMSAVTKEKPA
VGTDAKAATEVKKKAVLEEVFSASICKDEMSTVAKATKTQSGPKDMEMADVSEKTTQSQL
GEPKKVEKSATPKDIGKSVTPKDIGKSVTPKDAEKCATPKDTEKSTKLVTPKEGGKLATP
KDTEKSAMPKDTVKYAKSAALKEAEKLATSKDAEKSAKSATPTPKDAEKSVKSATPTPKD
AEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSVKSATPTPKDAEKS
AKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSVKSA
TPTPKDAEKSVKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTP
KDVEKSAKSATPTPKVAEKSAKNTETTSKKIVLSSRGQKPDTEETEKLTDTKPVAEKGEK
LVTFQDAKQLPSLKKSVPVEVKQEEPMEMRSEKSTHDNIKIKGHAEKGWPKKAVKSGVKS
ETNPIKDPKPMNCDASSEKQAISKKASSLTEGETDKSQDKVIKEDATTQGCPPKEDGSKP
DHPKKNDKKEDDGTEKDDTNSTVEEKLGQAKASEGSEEDDNKEDEDKGEKKDAGTTSEIQ
EEGIRLKIRGITHRRRAELQRKEMESGSDTGETGRSLRRSPRICRPTAKGVEFQDRRMEK
KEATPPVEKGDEEKTVQRKPREKVDQDGLYKSKGRRRRKTRWSNTRTQRRKNNDSGEDDE
SESSEEESEEDNSDESFKVERGKRRKRNRERHSDDSDTSDDDLPPNDDPCKHCGLPNHPE
LILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCDKLEEQLTNLDASLKKRERA
ERRKERLVYVGISVENIITPSLEVEEEREEEVVKKEKKERTKSWGRRSTRAKKSISYRFD
EFDEAIEEAIEEDIREADGGGAGRGKDMANITGHSRGKDMSTILAAGEGGEGKENGCLPR
PNASQRRKKRRRLNDLDSDSTMEEEESEDEFRLSDSTEEEEFVASGKSDAESEVAVDSND
DSDFGSTQRRSARTRRPAKRQRSAQPRRRRTPRRYSDDEEETSEEEMVSEGSSEFSDSDL
DCSRRRSRRSQTTKQVNYCESSGDSDGSKANTNRDKVKPWRRLASSDSEASSSRGSDDSE
RERTRLKRRADSSEKESQQHRRRLSLKRRRASEEDDDDHDSDESSEGERPVRKRVNRIDS
DDSDKEEEKETKETREEEEGGVLGKGASPLDYGLVELHPPTNGQSPIKALDGLAHIGPQK
PGATAVAIAPNGLELAPQDDDEDDLLGVTDLVDFVCNSDML
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcagcatcggagggttctacccccggtttttgcccaagctacgccgtg
atatgctcttttctagagcggtatggaaccttgcttgatttaccggagcttacatttcca
cagttggagcgatatctccaagacacaatctcagttccaaagatcttggtggaccttcac
gtgaagttgttgaggaagattggcaagtcagtgtccgcagacagatgggagaagtacctt
gtgaaggtgtgccatgagttcaacagtacttgggcatgggagcttgaaaataaaggatac
agggacatgtctgtggagtacaagactggaatcctcaaacatttgtgtgaatgccagttt
gatgacaatgtaaagttcaagacagcaatcaatgaggaggatcctgataagatgcggctt
ctccccattggcaaggacaaagatggcctgatgtactggttccaacttgaccaggacaag
aatgtgagggtctatgtggaggagcaggacgacctggacgggtcttcctggaagtgcatt
gtcagagacagaaacagcttggctgagatcctggcactgctaaagactcaaatcgaccca
gcactgttgacaaagaaagaaggagaggaggaagatgaggcgaaaaataatactggggga
gaaggggaagttaaaaagacagaggatacctcagaggatgaagaggacaaaccctccaag
ggaacaacttccttagtctctccaaaaaccgagattacagaaaaagaggaatcacagcta
gatgaatcagaagccaaatcctcattgaatggcctcaaagatgagtcagagtcaaaaagc
caatcagaggagcctatggtggatgacaaggtcaccataaacacccgggccatcaaagaa
gagccaatggaggtgtcagaatccaaggagagcacagccacaaatgctacagagcctctt
gcagagaaaccttgtctgatgccacaaacagaacagacagatgaagccaagaggaagact
gcaaatgaactccaaagggccatgaagaatgaccagcaggccaaaatcccattgaaaaag
agagagatgaaactttgtgaaaatgttgataataatagtggcggtggcagcagtatcttt
gtgcgaaacccatccgttgctcttgtcaaagaagctcctgaagttgaggagacaagtaaa
gagatatctgatgccccggtggggacgatagagtgtataagtgatcaaatgaatggtgat
gctcagcctacaacagaaaaaagcatcaataatggtttaagagactctgttgatggcaaa
aaacagcaaacaaaagctgctgctggggaagaacgtgaagcagcagaagctagtgcaaaa
gagaaaataaacctggataaggagaaagaggagatggcaagcaacactgaggtggccatg
gccaatgaaacaagtctacagaaaatggttccagcagaaaaggaaagcactgaagattca
gaggaagtaaaaaaatcagccttaaaagaggctaaatctccatcccctctaatgtcaaag
ccattgacttcatctaaggatgcaacaagcccaccggagaagcactatgattgtaaagag
gaacaaaatatcaaggtatccaagtgggatgtaaaagtgtgtcgtacagaacacacaacc
tatacatcaatagaaaccgatgaaaaccctttgtctagtaagtcacagaaaccagatgaa
actaaaggaacagattcatccattacctctcaagaggtcaagtcagctgtctctaaggaa
acagacaaaacagttgtcaataaggacggttatcccctttctgtcgtgaaagatatggaa
aaaccaccctgcacaaaaggtacagaaaagtggtcaaaccctaaaaacccagaaacgtca
gtcattactaaacaaaccgggagacctgacccaattacagagaaaccagaccactctaaa
tgcataaagatgccaacagtcgtaaaaaatacagagaaaccacctgacaaagagggtgta
gagaaatgtgatgtttctaaagatatcaaaacttctgtaattaaaaagacagagatttca
gaaaagagtaaagatgctgagaacctggccatctctcaagagaccaatacgtcctcattc
cttaaaaaggcagacaaaccagtttccaataaagaagcagagaaactggagagcattaaa
gagactgataaatcgttggtcattaaaatgacagtgaaaccagaggcatctaaacataca
gagaaatgtgataaccctaaagacaataaaatgtcagctgtcaccaaggagaaacctgct
gtaggcacagatgcaaaggctgccactgaggtgaagaaaaaagctgtcctggaggaagtt
ttctcagcgtcgatctgtaaagatgaaatgagtactgttgctaaagcgactaagacacaa
tctggaccaaaagacatggagatggcagacgtctctgagaaaacaacccaatcacaactg
ggtgaacccaaaaaggtagagaaatcggctacccctaaagatattgggaaatcggttacc
cctaaagatattgggaaatcggttacccctaaagatgcagagaaatgtgctacccctaaa
gacacagagaaatctactaaattggttacccctaaagaaggtgggaaattggctacccca
aaagacacagagaaatcagcaatgcctaaagatacagtgaaatatgctaaatcggcagca
cttaaagaagcagagaaattggctacctctaaagatgcagagaagtctgctaaatcagct
acacctacccctaaagatgcagagaagtctgttaaatcagctacacctacccctaaagat
gcagagaagtctgctaaatcagctacacctacccctaaagatgcagagaagtctgctaaa
tcagctacacctacccctaaagatgcagagaagtctgctaaatcagctacacctacccct
aaagatgcagagaagtctgttaaatcagctacacctacccctaaagatgcagagaagtct
gctaaatcagctacacctacccctaaagatgcagagaagtctgctaaatcagctacacct
acccctaaagatgcagagaagtctgctaaatcagctacacctacccctaaagatgcagag
aagtctgctaaatctgctacacctacccctaaagatgcagagaagtctgttaaatcagct
acacctacccctaaagatgcagagaagtctgttaaatcagctacacctacccctaaagat
gcagagaagtctgctaaatcagctacacctacccctaaagatgcagagaagtctgctaaa
tccgctacacctacccctaaagatgcagagaagtctgctaaatccgctacacctacccct
aaagatgtagagaagtctgctaaatctgctacacctacccctaaagtcgctgagaaatcg
gctaaaaacacagagactacctctaaaaagattgttctatcttctaggggacagaaacca
gacactgaagaaactgagaaactgacagacacaaagccagttgcagaaaaaggagagaaa
cttgtcacctttcaggacgccaagcaattaccctctctcaaaaagtctgtcccagtggag
gtgaaacaggaggagcctatggaaatgcgttcggaaaagtcaacacatgacaacataaag
atcaagggacatgctgaaaaaggctggccaaaaaaggctgttaaaagtggagtgaagtct
gagaccaaccctatcaaagacccaaagcccatgaactgtgatgcatcatcagaaaaacag
gctattagtaagaaggcatcatctctcactgagggtgagacggacaaaagccaggacaaa
gtaatcaaggaagatgccacaacacagggatgccccccaaaagaggatgggagtaagcct
gatcatcctaagaaaaatgacaaaaaggaggatgatggaactgagaaagatgacacaaat
tcaacggtagaagagaaattgggtcaggcaaaagcaagtgaggggtctgaggaagatgat
aacaaagaggatgaggacaagggtgaaaaaaaggatgcgggaacaacatcagagatccaa
gaggagggaattcgcctgaaaatacgcgggattacccaccggaggagagctgagctccag
agaaaggagatggagtctgggtcagatactggtgagactgggagatccctgaggaggtca
cccaggatctgcaggccgaccgctaagggggtggagttccaggacaggaggatggagaag
aaagaggccacaccccctgtagagaagggtgatgaggagaaaactgttcagaggaaaccg
agagagaaggttgatcaagatggactgtacaaatctaaggggcgacggaggagaaagacc
cggtggtccaacactcgaacacaaaggcgcaaaaataatgattctggtgaagacgacgaa
agtgagtcgagcgaagaggagagtgaggaggacaacagtgatgagagctttaaggtggag
aggggcaagaggaggaagaggaacagagagaggcacagcgacgattctgacacctcggat
gatgacctccctcctaacgatgacccctgtaaacactgcggcctccccaaccatcctgag
ctgattttgctgtgtgactcgtgcgatagcggctaccatacggcctgcctcagaccccct
ctcatgatcatcccagacggggagtggttctgcccaccctgccaacataagctgctctgt
gacaagcttgaggagcagcttactaatctcgacgcttccctgaaaaagagggagcgcgcc
gagcgacgaaaagagcggttggtctatgttggaatcagtgttgaaaacatcatcactccc
tcgttggaggtagaggaagaaagggaggaagaggtggtgaagaaggagaagaaagagcga
accaagagctggggtcgaaggtccacaagggcaaagaaaagcataagctacaggtttgat
gaatttgatgaggctattgaggaggcaattgaagaagacatcagagaggctgatggtgga
ggagctggtcgaggcaaggacatggccaacatcacaggccatagcagagggaaggacatg
tccactatcctggcagcaggagagggtggcgagggcaaggagaatgggtgcctaccgcgg
cccaacgccagccagcgcaggaagaagcgccggcgtctcaacgacctggacagcgacagc
actatggaggaggaagagagcgaggacgagttccgtctcagtgacagtacggaggaagag
gagtttgtggcgtcggggaagagcgatgcagagagcgaagtggcggtcgactccaatgac
gacagcgacttcggcagcacacaacgcagatccgccaggactaggaggccagccaaacgt
cagaggagtgctcagccgcgacggcgccgcacaccacgacggtactcagacgatgaagag
gagacgagtgaggaagaaatggtgtcggagggctccagcgagttcagcgatagcgacctg
gactgtagccgacgccgatcccgccggagtcagacgacgaagcaggtcaactactgcgag
tcgtccggagactctgacggctccaaggccaacacaaaccgtgacaaagtcaaaccgtgg
cggcgcctcgccagttctgacagcgaagcaagctcctccagaggctcagatgacagcgag
agggagaggactaggttaaagaggagggccgactcgtccgaaaaagagtcccagcagcac
cgcagacgactttcgctgaaacggcggcgagcctctgaggaggacgatgacgaccacgat
tccgatgaatcatcggagggagaacgtcctgtccgcaagcgtgtgaaccgcatcgactcg
gacgactctgacaaggaggaggagaaggagacgaaagaaaccagggaagaggaggaaggg
ggagtgctggggaagggagccagcccgttggactacggcctggtggagctgcatcccccc
accaacggacagagtcccatcaaggccctagacggcctggctcacattgggccccaaaaa
cctggggccacagctgtcgccatagcgcccaatggactggagttggcaccacaggatgat
gatgaggatgacctgctgggggtcacagacctggtggactttgtctgcaacagtgatatg
ttgtaa
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integrated database retrieval system
