Oncorhynchus tshawytscha (Chinook salmon): 112229098
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Entry
112229098 CDS
T05605
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112229098
03029 Mitochondrial biogenesis [BR:
otw03029
]
112229098
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
112229098
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
112229098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
GrpE
Herpes_UL36
Borrelia_P83
LMBR1
Motif
Other DBs
NCBI-GeneID:
112229098
NCBI-ProteinID:
XP_024250757
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All DBs
Position
LG03:18385830..18396274
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AA seq
478 aa
AA seq
DB search
MSLVDLGKRLLEAARAGLDDDVRTLMVNGAPFTTDWLGTSPLHLAAQYGHHSTAEVLLRA
GVSRDARTKVDRTPLHMAATEGHSNIVELLVSSGADINAKDMLKMTALHWAAQHGHREVA
ELLLKYGADVHSLSKFDKTPFDIAMDTSNTELMILLQDGMQNQVNMNPEPQFIISSAGVV
NLSDLVNTTAKSGMGNWSTGYRESVSTTSVLATLAALAEASGPMGKNAGKSEDAIAADSV
DSAIQHVVGDGGQRVITIVTDQHGNLQPAGLGQQFFVTMQGQQMVAVPAGQITEEVVEQE
PYPSPARKRRIEPAAILTRPKDKKAKSGDSSREQLQKQLQEANRKAQEYRTQLLQKEQEA
EQYRLRLEEAIEQQQNNNTSNATGSTCTVVQEAEEEVVQMEKQHETEERVVEEDKVEGEE
DVPFPEDTILVKVEEELDSGEGEQITVDDTEETEKASTKVTTTPKRGRGRGRGRGRRR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggtggacctgggaaagcggctgctggaggctgcacgggcagggctggatgat
gatgtcaggaccctcatggtcaatggagctcccttcaccactgattggctggggacttcc
ccgctccatctagctgctcagtatggacaccactccacggctgaggtgcttctccgagca
ggcgttagcagggatgcccggaccaaagtggacaggacccccctccacatggcggccaca
gagggccactctaatatagtggagctgctagtcagtagcggagcggacatcaacgctaag
gacatgctgaagatgacagccctgcattgggcggcccagcacggtcacagagaggtggca
gagctgctgctcaaatatggagcagacgtccactccctcagcaagtttgacaagacgccc
tttgacatcgccatggataccagcaacactgagctcatgatactgttacaggatggtatg
cagaaccaagtgaacatgaaccccgagccccagttcatcatctcctctgctggggttgtg
aacctctctgacctcgtcaacaccaccgccaagtcaggtatgggcaactggagcacaggt
tacagagaatctgtctctaccacctcagtcctggcaacactggcagccctggcagaagcc
tcaggtcccatgggtaaaaatgcaggcaaatctgaggatgcaatcgctgcagattctgtg
gattcggccattcagcatgtagtgggtgatggaggtcagagggtcatcaccatagtgacg
gaccaacacggcaacttgcagccagcgggacttgggcagcagttttttgtcactatgcag
gggcagcaaatggtggcagtcccggctggtcagatcacagaggaggtggtggaacaggag
ccttatccctctcctgcacgcaagaggagaatagagcctgcagccatcctaaccagaccc
aaagacaagaaagcgaagtcgggggacagcagtcgggagcagctccagaagcagttgcag
gaggccaaccggaaggcccaggagtaccgcacacagctcctacagaaggagcaggaggct
gagcagtaccgcctccgactagaggaggccatagagcaacaacagaacaacaataccagc
aatgctactggttctacctgcacagttgtccaggaggcagaagaggaggtggtccaaatg
gaaaaacaacacgagaccgaggagagagttgtggaggaggacaaagtggaaggggaggag
gacgtcccatttccggaagacaccattctggttaaagtggaggaggagctggattcaggg
gagggagaacagataacagtggatgatacagaggaaacggagaaggcttcaactaaggtc
acaacgacccccaaacgggggagagggaggggacgaggacgtggaaggaggcggtag
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