Oncorhynchus tshawytscha (Chinook salmon): 112229134
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Entry
112229134 CDS
T05605
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein-like isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229134
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112229134
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
WD40
Motif
Other DBs
NCBI-GeneID:
112229134
NCBI-ProteinID:
XP_042167262
LinkDB
All DBs
Position
LG03:18332192..18362351
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AA seq
1305 aa
AA seq
DB search
MAMDCIGSSDAFKLGILGSIVRRSLDAPRRLVLAHPRTAPPDGRQLTPPPRMTVRERLRE
KISAAFYRHGLLCASYPVPIILFTSASILACCYPLLRLPLPGTGPVEFTTRVRDYTVPSH
EPQGDLGERPDWYRGPPVAYIQPVLVKAAVSPWDSTLVPVDVFRSPLGRVFSLLEEIRNH
VHDDGSGVRSLEALCLQVTDLLPGLRRMQRVLPEHGCLLVSPGNYWQNQRELFDSDPDLL
KTVHQHEPKGLHTSATLRDLLFGVPVKHTGVSLYSRKRVVTYTITMVLGSYDARFLSSLR
ARLRQLHPSVNCSLREDHMVHVHFKEEIGMAELIPLVTTYIILFAYIYFSTRKIDMVKSK
WGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTP
VDLEVKLRIAQGLSNESWSIMKNMATELCIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQ
MFFFTTVLSIDIRRMELADLNRRLPAEAGMPLPKPGPLRPREAPPPPRPSPHTITLQTPA
FRNLRLPKRLRVVYFLARTRLAQRFIMVGTVIWIGILAYTDPAGLRTYLAAQVSEQSPLG
EGGAGGLPPHLGVAPVFPGPGGDPADTLSVLPAPAEPTPLPENQSQGHHGAPGEGVPLVP
QISWGAEDEEGWRRLSFRHWPSLFSYYNITLAKRYISILPVIPITLHLSPREAIETRHPQ
DTRHPPPPSLKTNDLPADLTLYKVAALGLAAGVLLVLLLFCLYRVLCSRNYGQNGVAHGR
RRRGDLPCDDYGYSPPISEISPLLLCGHSMDIECLASDGMLLASCCLAGQIRVWDTQTGD
CLTVIPKHGLRRSSSSGCWEQRDGWDAVGVAEPENLGGGTEPGGGVFDEDKGYPLRRRTT
PRPALFENQPDLTPLIDTNFDSQPPSHLLLTPPRNGFDFGGLVEKAYLEHEPPSPGLTAS
YPSPLSGPPPQRRRSLGYIQPPAPQGQETPDWESAVWAMELRGNLIAAGRSNGKLELWDA
VEGSLRCSNEDGVSGITALAFLNNRIVAARLDGSLDFFTVDINKPLGLLQYRGPPGRSNM
PPSPCYSSEDVISCQLTRSVQCAHQKPITVLRAAAGRVVTGSQDHTVRVYRLEDSCCLFT
LQGHSGGITAIYIDQTMVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCTTSCVI
SSGLDDLICIWDRSTGIKLYSIQQEVGCGASLGVISESLLVTGGQGCVSFWDLNFGDLLQ
TVYLGQSSDGQGVRQLVVLNNAAIVCDFGSELSLVYVPAVLEKLD
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggactgtataggatccagtgatgccttcaaactggggattttaggaagcatt
gttaggaggtccctggatgccccgcggcgcttggtcctcgcccacccgcgcaccgcgccc
cccgatggccggcagctgaccccgccccccaggatgacggtgagagagcggctgcgggag
aagatctcggcggcgttctaccgccacgggctgctgtgcgcatcctatccggtgcccatc
atcctcttcacctccgccagtatcctcgcctgctgttaccccctgctgcggctgcctctg
ccgggaaccgggccggtggaattcaccacacgggtccgagattacaccgtcccttcccat
gagccccagggagacctcggcgagcggcctgactggtatcggggtcctccggtggcctac
atccagccggtcctggtgaaggcagctgtgtctccctgggacagtacgctggtccctgtg
gacgtgttccgctccccactgggccgcgtattcagcctgctggaggagatccgcaaccat
gtacacgacgacggttctggggtcaggagcttggaggcgctctgcctgcaggtgacggac
ctgttgccggggttacggcgtatgcagagagtgctgccggagcacggttgtctgctggtc
tcccccggcaactactggcagaaccagcgggagctgtttgactctgaccccgacctgctg
aagaccgtccaccagcacgaacccaaaggactgcacacctccgccactcttagagacctg
ctgtttggcgtcccggtgaaacacacaggggtgagtctgtacagcaggaagagggtggtc
acctacaccatcaccatggtcctgggcagctacgacgccaggttcctgtctagcctgcgt
gcgcgtctccgccagctacacccctcggtgaactgcagcctacgcgaggaccacatggtg
cacgtgcacttcaaggaggagataggcatggccgagctcatccctctggtcaccacctac
atcatactgtttgcctacatctacttctccacacgtaagattgacatggtgaagtcaaaa
tggggcttggcgctggctgccgtggtaacagtgctcagctctctgcttatgtctgtgggg
ctctgcaccctgttcggcctgacgcccacactcaatggaggtgagatcttcccctatctg
gtggtggtgatagggctggagaacgtcctggttctcaccaagtctgtggtgtccacccct
gttgacctggaggtcaaactacgcatcgctcagggccttagtaatgagagctggtctatc
atgaagaacatggccacagagctgtgcatcatcctcataggatatttcaccctggtgcct
gctatccaggagttctgtctgtttgctgtggtgggcctggtgtctgacttcttccttcag
atgtttttcttcaccacagttctttccattgacatccgacgcatggagttggccgatctg
aaccggcgtcttccggccgaggcggggatgccccttcccaaaccgggccccctgcgccct
cgggaggcgcctcctcccccacggccctcgccccacaccatcaccctgcagacgcccgcc
ttcaggaacctgcgcctgcccaagaggctccgtgtggtctacttcctggcccgcacgcgt
ctggcccagcgcttcatcatggtgggtacagtgatctggattggcatcctggcctacact
gaccccgctggcctccgtacctacctggcagcccaggtgtctgagcagagccccctgggg
gagggcggggccgggggtctgcccccgcacctgggagtagccccggtcttccctggacca
ggaggggaccccgccgacaccctcagtgtcctccccgcccccgctgaacccaccccgctt
ccagagaaccagtcccagggccaccacggggcccccggggaaggagtacccctggtgccc
cagattagctggggggcggaggatgaggagggctggaggaggctgtctttcagacactgg
ccctcgctcttcagctactataatattactctggccaagagatacatcagcatcctgcct
gtcatccccatcacgctccacctgagcccccgggaggccatcgagacacgtcacccccag
gacacacgccaccccccgccgcccagcctcaaaactaacgacctgcccgcagacctcacg
ctctacaaggtagcagctctgggcctggcggcaggggttctgctggtgctgctgctcttc
tgtctctaccgggtcctctgttcccgcaactacggccagaacggcgtggcccacggacgc
cgtcgtcgcggtgacctgccctgcgacgactacggctactcgccacccatcagcgagatc
tcccccctgctgctgtgtggacacagcatggatatagagtgtctggcgagtgacggcatg
ctgttggccagttgttgtctggcaggacagatccgtgtgtgggacactcagactggagac
tgcctcaccgtcattcctaaacatgggctgcggcggagtagcagcagtggctgctgggag
cagcgggatggttgggacgccgtgggtgtggccgaacctgaaaatctggggggcgggaca
gaaccagggggcggggttttcgacgaggacaagggctaccccctcaggcggcggaccacc
ccacgtcctgccctctttgagaaccaacccgacctcacccccctcatcgacaccaacttc
gactcccagcccccctcccacctcctcctcaccccgcccaggaatggctttgacttcggg
gggctggtggagaaggcctacctggagcacgagcctccctcgccgggcctcactgcctcc
tacccctcacccctgtcgggaccccctccccagaggagacgcagcctggggtacatccag
ccccctgctccacagggccaggaaaccccggactgggaaagcgccgtgtgggccatggag
ctccgggggaacctcatcgctgctgggaggagcaacggcaaactagagctgtgggacgca
gtggagggctcgttacgctgcagtaatgaagacggcgtctcggggatcacggccctggcc
ttcctcaacaacaggattgtggcggccagactcgacggctctctagacttcttcactgtc
gacatcaacaagcctctgggcttactgcaatacagaggtccccctgggcgtagtaacatg
ccgccctcgccctgctacagcagtgaggatgtgatctcatgccagctgacgcgctcagtg
cagtgtgcccaccagaaacccatcacggtgctgcgagccgctgccggcagagtggtcacg
ggcagccaggaccacaccgtcagggtatatcgtctggaggactcatgctgtctcttcacg
ctccagggccactctgggggaatcactgccatctacatagaccagaccatggttctggcc
agtggggggcaggacggagcaatctgtctgtgggatgtgctgacgggcagccgggtgagc
cacgtgtacggtcaccgtggcgacgtgacctcactggtgtgcaccacatcgtgcgtgatc
agcagcggcctcgacgacctcatctgcatctgggaccgcagcacgggcatcaagctctac
tccatacagcaggaggtgggctgcggggccagtctgggggtgatctctgagtctctcctg
gtgacagggggccagggctgtgtgtccttctgggacctgaacttcggggacctcctccag
acggtctacctgggccagagcagcgacggccagggggtccgccagctcgtggtgctgaac
aacgccgccatcgtctgcgactttggctccgagctcagcctggtctacgtacccgcggtg
ctggagaagctggactga
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