Oncorhynchus tshawytscha (Chinook salmon): 112229210
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Entry
112229210 CDS
T05605
Name
(RefSeq) integrin beta-8-like
KO
K06591
integrin beta 8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04514
Cell adhesion molecules
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112229210
04514 Cell adhesion molecules
112229210
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112229210
09142 Cell motility
04820 Cytoskeleton in muscle cells
112229210
04810 Regulation of actin cytoskeleton
112229210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112229210
04515 Cell adhesion molecules [BR:
otw04515
]
112229210
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112229210
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin beta subunits
112229210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
PSI_integrin
EGF_2
EGF_Tenascin
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
112229210
NCBI-ProteinID:
XP_042166011
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All DBs
Position
LG31:complement(29974613..30030378)
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AA seq
809 aa
AA seq
DB search
MTSWLRKYDNPVLLFLLLAANITSGSSHSGERVCSSPPVSSCSECIQRGPRCAWCFQERF
LDGAEVGERCDLAVTLARRGCGLEFIEHPEVMVEVNPMTSRTQVSPGEITLTLRPGAEAS
VVVAVQQLERYPVDLYYLVDVSASMQDNLDQLKKVGVALSTRMREHSSDLRLGFGSFVDK
NVSPYINVHPSKINNPCSDYEVKCLPAHGFHHVLSMTSNMSEFTRIIKRQRISGNMDTPE
GGLDAMLQATVCQGEVGWRGEAKRLLLLMTDQPSHLALDSRLAGIVTPHDGLCHLENSVY
MKSSTMDHPSLGLLAEKLLENHIYSLFAVEHLQYQWYEELVTLLPGSSLLFQAPNLIDLV
VDAYKRLLSVVQVSVSVEDRAFSRFLVSVSPLCPEGSESHDHSCSNVQPNQTVYFNITIG
LLSCPDDDDEDDVVQVFVRPVGYNESVVIKVRSRCRCRRCHDDATHQSSCGEDTPDTDHN
NQGVNTHTHLSHALTSHTHTPELNLEHTHSQEGPRQCGAEASEVDCSGRGVCVCERCVCE
RNSLGTVYGTYCQMDDYSCPYQREILCGGRGVCVSGECVCEEGWTGESCGCPVSTATCLL
NNGLLCSGRGRCVCGRCVCDDHQHSGEFCERCPTCHSSCQSHWRCIDCHLSHGLSQRKMG
HCNHTCPPLVVYVNDVTGEVWRQCVYMKDNCRYRFYTELFSRNTQLHINTQPECVSRGRY
MRMFVSVCVLTFLSGLVMIAVLVLLLQRRSLPQGGATDPQYNPTGKDQSYIPTTNEKTTS
YWRNCPLDPDQPMEMYITIPKMPMGEPWQ
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctggctacgtaaatacgacaatcctgtgctgctcttcctgcttttggccgct
aacatcaccagcgggagctcgcattccggtgagcgtgtgtgttcgtctcctcctgtctca
tcatgttcagagtgcatccaacgcggaccacgatgtgcctggtgctttcaggagcgtttc
ctggatggagctgaggtgggagagcgctgtgacctggcagtgaccctggccaggaggggg
tgtggcctagaattcatagagcatccagaggtcatggtggaggtcaaccctatgaccagc
agaacccaggtttcacctggagagatcacacttacactccgaccaggtgctgaggccagt
gtggtagtagcagtacaacagttagagaggtatcctgttgatctgtactacctggtggac
gtatcagcatccatgcaggacaacctggaccagctgaagaaggtgggcgtggccttgtcc
acccgtatgagagaacattccagtgatctgcgcctggggttcggctcctttgttgacaaa
aatgtctctccctacatcaacgtacacccctccaagataaacaacccctgcagtgactac
gaggtgaagtgtcttccagctcatggcttccaccatgttcttagtatgacgtccaacatg
tcagaatttacacgcatcatcaagagacagaggatatcaggcaacatggacacacctgag
ggagggctggatgctatgctgcaagctactgtatgccagggagaggtgggttggcgtggg
gaggccaagcgtctgttgttgttgatgacagaccagccttctcacctggcgttggacagc
agactggctggtatagtcacaccccatgatggactctgtcatctggagaacagtgtttat
atgaagagttctaccatggaccatcccagtttaggcctgctggccgagaagcttctagag
aaccacatctattctctctttgccgtggaacacctacaatatcagtggtatgaggagctg
gtcacgttgctaccgggctccagtcttctgttccaggctcccaacctcatagacctggta
gtggatgcatacaagaggttgttgtcagttgtccaggtgtctgtgtcagtggaggacaga
gcgttcagtcgttttctggtcagtgtctctcctctttgtccggaaggatctgaatcccac
gaccacagctgttccaatgtccagcccaaccagacggtctacttcaacatcaccatcggc
ctgctgtcctgtcctgatgatgatgatgaagatgacgtggtccaggtcttcgtcaggccc
gtgggttacaatgagtcagtcgtcatcaaggttcgatcacgatgtcgctgtcgccgttgc
cacgacgacgcaacccaccagtcgtcttgtggagaggacaccccagacacagatcataat
aatcaaggagtcaacacacacacacacctctcacacgcactcacctctcacacacacaca
ccggagttgaacctagagcacacacactcccaggaggggccgcggcagtgtggtgcggag
gcatcagaggtggactgtagcggtcggggagtgtgtgtgtgtgagaggtgtgtgtgtgag
aggaacagtctggggacggtgtatggaacgtactgtcagatggacgactactcctgcccc
taccaacgcgaaatactgtgtggaggacgaggtgtgtgtgtgtccggtgagtgtgtttgt
gaggagggctggacaggggagagctgcgggtgcccggtctccacggcaacctgcctgctc
aacaacgggttgctatgcagtgggcgtggcaggtgtgtgtgtggcaggtgtgtgtgtgat
gaccatcaacattctggagagttctgtgagagatgccccacctgccacagctcctgtcag
tcacactggaggtgtatagactgtcacttgtctcacggtctgtctcagagaaagatgggg
cattgcaaccatacctgccccccattggtggtttatgtcaatgatgtcacaggtgaggta
tggagacagtgtgtttatatgaaagacaactgtcgctatcgcttctacactgagctgttc
tcaagaaatactcagctacacatcaacacacagcctgagtgtgtatccagagggcggtac
atgaggatgtttgtcagtgtgtgtgtgttgacattcctctctggcctggtgatgatcgct
gtactggtgttgctgctgcagagacgatctctgccacagggtggcgccactgacccacaa
tacaaccccactggcaaggaccagtcgtacatcccaaccaccaatgagaagaccacatcc
tactggaggaactgccccctggaccctgaccagccaatggagatgtatatcaccattcca
aagatgcctatgggtgaaccctggcagtga
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