Oncorhynchus tshawytscha (Chinook salmon): 112229211
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Entry
112229211 CDS
T05605
Name
(RefSeq) rho family-interacting cell polarization regulator 2-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112229211
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112229211
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112229211
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
112229211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HR1
HEAT_2
HR1_TOCA
Motif
Other DBs
NCBI-GeneID:
112229211
NCBI-ProteinID:
XP_042166349
UniProt:
A0AAZ3QST9
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All DBs
Position
LG31:complement(28524837..28658309)
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AA seq
1189 aa
AA seq
DB search
MTRTTAHCWHQAMELSRRLHWIRNRPWRARARRREFSRVSSRVPEIMAAGTHSPGGPNGI
IRSQSFAGFSTLQERRSRCNSFMGNSAVQKKPTSKPKKPHLSGHKASSGSREPQPERVEE
VYGALKQGLDEYLEVHQTGLDKLTSLMKDMKRNSRLGVLYDLDKQIKTIERYMRRLEFHM
SKVDELYEAFCIQRRLREGASKMKQAFSASPSTKATRESMSEVNRRYKEYTENMSTLEGE
LENMLGEFHIKMKGLAGFARLCPGDQYEIFMRYGRQRWKLKGKIEVNSRQSWDGEEMVFT
PLITDLINIKVTELKGLATHILVGSVICETKDLFTAMPQVVAVDVNDLGTIKLNLEVTWF
PFDVEDLTLSSGNVSKATALQRRVSIYSQGTPETPTFQDQSFFKWHPSPTQHRLSPTLHR
LSPTLHRLSPTQHRLSPTQHRLSPTQHRLSPTQHRLSFLHGLRNSLLEKLRRSRSFGDLV
SLQPRPKSSLEGYVTESTLPDDVFENSGCGNTECKRLSFTFSDTSVSSPSLAPGQSNPEI
TVTPPETCPQPQIPNVEVTVRIHADVVEEAEEGEEEEESSSGSVSTSLVSEEAESEWERA
ESQCNGGSVSLCSERQLSAAAPGGVCPDLARPDRDGDEDDSSELLKPVELDTEEPGSLTR
QLVRRLTSSDILPEAGVLSWAGEGSRAFLESNLEETLQSLLLRLESLGQRCRELQDLEQE
VMHLEDLLKCRLPGHRSRSSSLTLMVESALESFDFLNTSDFDDDDTGDDHSLQRSVFFDM
EADSIGPGGPHPEVRCHLSEALTEDTGVGNSVAGSPLPLTTGNENLDVAIVIHLQYCDHL
IQLLSSGGSPWQRRAQLQKLSAQTQLLEELGEISTERLGSITSAADVLPGLSERPARMAL
WSECSGSGALFHATLDRVLKHMHHCYTRPLQERHPHTAADTVIRLVVSEMVDRSDLASSP
TCHPPSARSQDVVPPSARSQDVVPPSARSQDVVPPSARSQDMVTVFQFHSYISEHSVEDM
EEHLLQVAREAVFAEGLSGGDSERCLKELEEVSHTGLCPRQQTLRALASLLSHQDPQLSE
AAAAYITSASSHTPFRSKAVDCYTQALWEDGVQTQRSACAALSCLQAVESLRAVVSLCNS
ADEELRHVAIETLLTFGEEGRLAYEQLDTMPREMVRLGTRRGNAVTTAF
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgactagaaccacggcacactgctggcaccaggccatggaactgtctagacggctgcac
tggatccgcaaccggccctggagggcccgggcccgccgcagggagttcagcagagtgtca
tcccgcgtcccagagatcatggcggccggaacacactcccctgggggacccaatgggatc
atccggagccaatccttcgccggcttcagcacattgcaggagagacgctcgcggtgtaac
tcattcatggggaactccgcagtgcagaagaaacccacgtccaagcccaagaagccccat
ctgtcagggcacaaggccagcagcggctccagagagccccagcccgagagggtggaggag
gtgtatggggcccttaaacaaggcttggatgagtatctggaggtgcaccagacagggctg
gacaaactcacctctctgatgaaggacatgaagaggaactccagactgggagtcctgtat
gaccttgacaagcaaatcaaaaccatcgagaggtacatgaggcggttggagtttcacatg
agcaaggtggatgagctgtatgaggcattctgtatccagcgcaggctgagggagggagcc
agtaagatgaagcaggccttctctgcatctccctccaccaaggccaccagagagagcatg
tcagaggtcaaccgcagatacaaggagtacacagagaatatgagcacgttagagggggag
ctggagaacatgctgggggagttccatatcaaaatgaaaggtcttgctggttttgctcgt
ctctgtccaggagaccagtatgagatcttcatgcggtatgggcgtcagcgctggaagctg
aaggggaagatagaggtaaactccagacagagttgggacggagaggagatggtcttcacg
cccctcatcacagacctcatcaacatcaaggtgacggagctgaagggcctggccactcac
atcctggtgggcagtgtgatctgtgagaccaaggatctgttcacggccatgcctcaggtg
gtggctgtagacgttaatgacctgggaaccatcaaactcaacctggaggtcacatggttt
ccattcgatgtggaagacctgaccctgtcttcagggaacgtgagcaaggccaccgccctg
cagagacgagtgtctatctacagccagggcacgccagagacacccaccttccaggaccag
tccttctttaagtggcacccctccccaacccagcatcgcctgtccccgaccctgcatcgc
ctgtccccgaccctgcatcgcctgtccccgacccagcatcgcctgtccccgacccagcat
cgcctgtccccgacccagcatcgcctgtccccgacccagcatcgcctgtccttcctccac
ggtctgaggaactccctgttagagaagctgagacgcagtcgctcctttggcgacctggtc
tccctccaacccaggcccaagtccagcctggagggttatgtgactgagtccaccctccct
gatgacgtctttgagaacagtgggtgtggtaacaccgagtgcaagcgcctctccttcacc
ttctccgatacttcagtctcctcccccagcctcgcccccggccagtccaaccccgaaatc
accgtcacgccccctgaaacctgcccccagccccaaatccccaacgttgaagtcaccgtt
cgaatacatgcagacgtagtggaagaggcagaggaaggtgaggaggaagaggagagtagc
agcggcagcgtgagtaccagcctggtcagcgaggaggcggagtcagagtgggagagggcg
gagtcccagtgtaacggaggatccgtctctctctgctcggagaggcagctgtctgcggcc
gctcctgggggtgtgtgtccggacctcgctcggccggacagggatggtgatgaagatgac
agctcggagctactgaagcccgtagaacttgacactgaagaaccaggcagcttgaccagg
caactggtgaggagactgacatcgtctgacattctgcccgaggcgggggttctgagctgg
gctggggaggggagccgggccttcctggagagcaacctggaagaaaccctgcagagtctg
ctactgaggctagagtcactgggacaacgctgtagagagctacaggacctggaacaggaa
gtgatgcacctggaggacctactcaagtgccgcctcccgggccacaggagcaggtcgtcc
agcctcactctgatggttgagagcgccctggagagcttcgacttcctcaacacctccgac
tttgacgacgatgacacgggtgatgaccactccctccagcgctccgtgttctttgacatg
gaggcggacagtatcggacctgggggcccgcacccagaggtcaggtgtcacctgagtgaa
gccctgacggaggacaccggggtgggcaacagtgtggccggcagccccctgcctctcact
accggcaacgagaacctggacgtggccatcgtaattcacctgcagtactgcgaccatctc
atccagctcctgtccagtggggggagcccttggcagcgtcgagcccagctccagaagctc
tcagctcagactcagctgctagaggaactgggagagatcagcacagaacgcctggggagc
atcacctctgctgctgacgtgctcccagggctgtcggagcggcctgctcggatggctctg
tggtcggagtgtagtggttctggtgcactgttccacgctacgctggaccgggtgctcaaa
cacatgcaccactgctacactcgcccactgcaggagagacacccacacaccgcagctgac
acagtgatccggctggtggtgagtgagatggtggacaggagtgatctggcctcctcccct
acctgccaccccccttcggcccggtcccaggacgtggtccctccttcggcccggtcccag
gacgtggtccccccttcggcccggtcccaggacgtggtccccccttcggcccggtcccag
gacatggtcacagtgtttcagttccacagctacatctcagagcacagcgtggaggacatg
gaggaacacctattgcaggtggccagagaagctgtgtttgcggagggcctgagcggtggc
gactcggagcgttgtctaaaggaattagaagaggtgtcacacaccggcctgtgtccccgg
cagcagaccctcagggcgctggcttccctcctctcccaccaagacccccagctcagcgag
gctgcagctgcctacatcacctctgcttcctcacacacacccttcaggtcaaaggcggtg
gattgctacacacaggccttgtgggaggatggagttcaaacccaaaggtctgcctgtgct
gctcttagctgtctacaggcagtagagagcctccgggcggtggtgtcactgtgcaactcg
gcagatgaggagcttcgccatgttgccatagaaaccctgctcactttcggtgaagagggc
cgcctggcgtatgagcagctggacacgatgccccgagagatggtacgactggggacgcgg
cgagggaacgccgtcaccaccgccttctga
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