Oncorhynchus tshawytscha (Chinook salmon): 112229221
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Entry
112229221 CDS
T05605
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112229221
09142 Cell motility
04814 Motor proteins
112229221
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112229221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112229221
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112229221
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
112229221
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
112229221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynein_IC2
WD40
Motif
Other DBs
NCBI-GeneID:
112229221
NCBI-ProteinID:
XP_042166082
LinkDB
All DBs
Position
LG31:23920170..24031548
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AA seq
670 aa
AA seq
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MADKSDIKAELERKKQRLAQIREEKKRKEEERKKKETETQQKAEAAPVDSDLDRKRRETE
ALLQSIGISPEPPLVHPLQPLMLDTCYFHYLVPNPMSPSKSVSRHSTPSETGSQDSAEGA
AAGRYRSGLSGVSKHQAQAQSDRTLQWDTDPSVLQLQDDSELGRRMHRLGASKITQVDFL
PREVVSYCKETQTPITGPTHLSEEEEEEDEEITELKPDPESDQQEEEDTKEMKEGYPCRE
LTEEEKQQILKSEEFLSFFDCSIRVMERALAQDSDIFFDYSGRDLDDKEGDLQGGSSLAL
SRLFYDEHWSKHRVITCLDWSPQYPELLVASYNNNEDAPHEPDGVALVWNMKFNKNTPEY
VFHCQSPVVSVGFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCV
NVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKSKAVAVTGMAFPTGDVNNY
VVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGLSCHNAVGPVDFSHLFVTSSFDWTVK
LWSTKHNKPLYSFEDNADYVYDVMWSPVHPALFAAVDGMGRLDLWNLNNDTEVPTASVTI
EGASALNRVRWGSAGKEVAVGDSEGRLWIYDAGELAVPHSEDWAHFACTLMEIKANRADG
EEEGPVELTP
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaagtgacataaaagccgagctagagcgcaaaaagcagcgcctagctcag
atcagggaggagaagaagaggaaggaggaggaaaggaaaaagaaagagacagagacgcag
cagaaggctgaagctgccccagtggactccgacttggaccggaagcgcagagagactgag
gcccttctacagagcatcggcatctccccagaacccccactagtccatccgctgcagcct
ttaatgttggatacgtgttattttcattatttagtcccgaaccccatgtccccatccaaa
tcagtgagccgacacagcacccccagtgagacgggaagtcaggactcagccgaaggggcc
gcagccggcaggtataggtcagggttgtctggcgttagtaagcatcaggcacaggctcag
agcgacaggaccctgcagtgggacactgacccctctgttctgcagctgcaggatgactct
gagctagggcgcaggatgcatagactgggggcgtctaagatcacacaggtggacttccta
cccagagaggtggtgtcgtattgcaaagagactcagacgcccatcactggccctacccat
ctgtctgaggaggaggaagaagaggatgaagaaatcacagagctgaagcctgatcctgaa
tctgaccagcaggaggaggaggacaccaaggagatgaaagagggctacccctgcagggag
ctgacggaggaagagaagcagcagatcctcaaatcagaggagttcctcagtttctttgac
tgcagcatcagagtgatggagagagccctggcccaggactcagacatattctttgactac
agtggacgagacctggatgacaaggagggggacttacaaggcggctccagtctggccctc
agtaggctattctatgacgagcactggtccaaacatcgagtcattacctgtctggactgg
tcccctcagtatccagagctgttggtggcgtcctacaacaacaacgaggatgctcctcac
gagcctgacggtgtagctctggtctggaacatgaagtttaacaagaacacacctgagtat
gtcttccactgccagtctcccgtggtgtcagtgggctttgctaggttccatcctaacctg
gtggtgggggggacctactctggccagatagtcctgtgggacaaccgcagccaccgcaga
actcctgtacagagaacccccctctcagctgcagctcacacgcacccggtgtactgtgtg
aacgtggtgggaacacagaacgccaacaacctgatcaccgtgtccacagacggcaggatg
tgctcctggagtcttgacatgctctctcagccacaggagagcatggagctggtgtacaac
aagtctaaagcggtggctgtgacaggcatggcgttccccactggagacgtcaataattat
gtggtggggagtgaggagggaaccgtgtacaccgcatccagacacggcagcaaggcgggg
atctgtgagatgtttgagggccaccagggaccagtgacgggcctcagctgtcacaacgct
gtcggccccgtagacttctcccatctcttcgtcacctcgtcgtttgactggactgtcaaa
ctgtggagcaccaagcacaataaacccctctactcctttgaggacaatgctgactacgtc
tatgatgtcatgtggtcccctgtgcacccagctctgtttgccgccgtggacgggatgggc
cgtcttgatctgtggaacctcaacaatgacacagaggtccccacagccagtgtgaccatc
gagggagcctccgccctaaacagggtgcgctgggggtcggcgggcaaggaggttgccgtg
ggtgactcagagggccgtttgtggatctacgacgcaggagagctggcagtgccccacagt
gaggactgggcacatttcgcctgtaccctgatggagatcaaggccaaccgggccgacggc
gaggaggaagggcctgtggaactgacgccatag
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