Oncorhynchus tshawytscha (Chinook salmon): 112229222
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Entry
112229222 CDS
T05605
Name
(RefSeq) epsilon-sarcoglycan-like isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112229222
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Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
TehB
Motif
Other DBs
NCBI-GeneID:
112229222
NCBI-ProteinID:
XP_042166365
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Position
LG31:complement(23730639..23761955)
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AA seq
439 aa
AA seq
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MDTTVVPIWIYMVVTILSTLHADRNVYPSAGVLFVHVLEREHFKGEFPPYPKPGDSSNDP
ITFNTNLMGYPDRPGWLRYIQRTSHSDGVLYGSPTAEHVGKATIIEIIAYNRRTFETARH
NLVINIMSTEEYPLPYQAEFYIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAVNITSA
LDRGGRVPLPINNLKEGVYVMVGADVQFSSCLREVENSQNQLRCSQEMEPVISCDKKFRA
QFDIDWCKINLVDITKMIMIHSNRPDPGTGVLPDIGGYNPPPESLKSRDFFADFLITLAV
PSAVAMVLFSVLGYSMCCRREGVDKRNMQTPDIQLVHHSSIQKSTKELRSMSKNREISWP
LSTLPVFSQSEEVVPPIHPDNYETTSMPLMQTQTNLQNQIQIPQQQPSGDRENYCMSTFR
RLEVNGIPEERKVAEAVNL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggacacaacggttgttcctatatggatttatatggtggtcaccatcctgtcgacgttg
cacgccgaccggaatgtttacccgtctgcaggtgtgctgtttgtccacgtcctggagaga
gagcacttcaaaggagagtttcccccctatcccaaacctggggattccagcaacgacccc
atcaccttcaacaccaacctgatgggctacccagaccggccaggctggctgcgttacatc
cagagaacctcacacagcgatggggtgctctacggatcccccactgccgaacacgtgggc
aaggccaccatcatagagattattgcctataacagacgcactttcgaaacggcccggcac
aacttggtcataaacatcatgtccacagaagagtacccactgccgtaccaggcagagttc
tacataaagaacatgaatgtggaggagatgttggcaagcgaggttctgggagacttccta
ggggcagtgaagaacgtgtggcagcccgaacgcctcaacgccgtcaacatcacctcagcc
ctggacaggggcggacgtgttcccctgcccataaacaacctcaaagagggtgtgtatgtg
atggtgggagctgacgtgcagttctcttcctgcctgagggaggtggagaactcccagaac
cagctccgctgcagccaggagatggagcctgtcattagctgtgacaagaagttcagagcc
cagttcgacatcgactggtgtaagatcaatctggtggacatcaccaagatgatcatgatc
cacagtaatcgtccagacccagggacgggggtcctgcctgacatcggggggtacaacccc
ccgccagagtctctgaagagcagggacttctttgccgacttcctcatcacgttggcggtg
ccctcggccgtggccatggtcctcttcagcgtcctgggttactccatgtgctgccggcgg
gaaggggtggataaaagaaacatgcaaacaccagatatccagttagtgcatcacagctcc
atccagaagtcgaccaaggagctgcggagcatgtctaagaacagggagatctcctggccc
ctctccaccctgcctgtcttcagccaaagtgaagaggtggtgccccccatacacccagac
aactacgagacaacaagcatgcccctgatgcagacacagacaaacctgcagaaccagatt
cagataccacagcaacagccatcaggagatagagagaattattgtatgtcgacatttcgg
agactggaggtaaatggtattcctgaggagaggaaagtggctgaagcagtgaatttgtga
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