Oncorhynchus tshawytscha (Chinook salmon): 112229294
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Entry
112229294 CDS
T05605
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229294
Membrane trafficking [BR:
otw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112229294
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_9
Ig_2
V-set
LRRNT
Ig_5
Motif
Other DBs
NCBI-GeneID:
112229294
NCBI-ProteinID:
XP_024250898
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All DBs
Position
LG03:18915049..18935720
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AA seq
624 aa
AA seq
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MFVESVVRWGAWSILLQCGLLGVSAGDFPWPCPARCVCRLETLEVNCSDKQLTSVSEGFA
SGTQRINLSRNKLKTLGRRQFFGMTQLEDLDISDNVIAMIEVEAFQGLQNLKTLCIRSNR
LKIISVGVFSGLPSLRFLDLSENEILVFLDFTFRELVSLHQLEAGENDLVFISQRAFTGL
QNLQELNLDRSNLTSIPTEALSQLQSLTRLRMIRLTISALPNNAFRRLHRLRSLVISHWP
LLDKLASNSLIGLNLTSLVISSCNLSTVPYQALRHLVYLGYLDLSYNPITAIQGNLLGDL
LRLQELHLAGGNLLRIEPGAFRGLAYFRLLNVTSNQLSTLEDSAFHSVGNLQVLRLDGNP
LACDCRLLWVVRRRQRLNFDGRQPTCSTPDMVREREFRDFSEKELPRLFTCRQARIVDRR
SQEVRVEEGTTVLFSCKADGDPMPSFTWLSAQRIPLSTTGRIRVLSNGTLEVRYAQVQDS
GTYQCTAGNAAGNDSLYVSLYVKGFPRNRTMPFFTDEGWIESSHAPTANSSAQVANQYPF
DAKTLIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDYVPRTSMGVGGGGGGR
GWRGCWQVYHEAYLRLCGRELGTH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtctgttgtcagatggggggcatggagcatcttgctccagtgtggatta
ttgggcgtgtcagcaggggacttcccctggccttgccctgccaggtgtgtgtgtcggctt
gagactttagaagttaactgctctgacaaacagctgacttctgtgtctgagggcttcgct
agtggcacccagcgcatcaacttatctcgtaacaagctgaagacgctgggtcgtcgccag
ttctttggcatgacccagctagaggatctggacattagtgacaatgtcattgccatgatt
gaagtggaggctttccagggcctgcagaacctcaagaccctgtgcattaggagcaatcgc
ctcaagatcatctctgtgggggtcttctccggactgcccagcctgcgcttcctggacctg
agtgagaacgagatcctggtctttctggactttactttccgtgagttggtgagccttcac
cagctggaggctggggagaatgacctggtgttcatctcccagcgggcctttaccggcctg
cagaacctgcaggagctcaatctggaccgcagcaacctgacctccatccccaccgaggca
ctatcccagctccagagcctgactcggctgcgcatgatccgcctcaccatctcggcgctg
cccaacaatgccttccgccgcctgcatcggctgcgtagcctcgtcatctcccactggccc
ttgctggacaagctggccagcaacagcctgattggcctcaacctcacctcgctggtcatc
agcagctgcaatctcagtactgtcccataccaggcactgcgccacctggtctacctgggc
tacctggacctgtcctacaaccccatcacagccatccagggtaacctgctgggggacctg
ttgcggctgcaggaactgcacctggctgggggcaacctgctccgcatcgagccaggggcc
ttcagggggctggcatacttccgtctgctcaacgtgacatccaaccagctcagcacactg
gaggacagtgccttccactcggtggggaatctgcaggtcctgcggctggatgggaacccc
ctggcctgtgactgccgactactctgggtggtccgccggcgacagcgcctgaactttgac
ggtcgccaacccacctgctccaccccggacatggtgcgagagcgggaattccgggacttc
tcagagaaagagctcccgagactgttcacctgccggcaggcccgcattgtagaccgcagg
tcccaggaggtcagggtggaggagggcactacggtgctcttctcctgcaaggcagatggt
gacccaatgccctcctttacctggttgtcagcccagcggattccgctctccactacgggg
cgcatcagggtgttgtccaatgggactctagaagtacgctatgcccaggttcaggacagc
ggcacataccagtgcacggcgggcaacgcagctggcaacgacagcctgtacgtcagcctc
tatgtgaagggtttcccacgtaaccgcaccatgccatttttcaccgacgaaggctggata
gagtcctcacacgcccctactgccaactcctctgcccaggtggccaaccagtacccgttt
gatgccaagacactgatcatcgccaccaccatgggcttcctgtccttcctcagctcagtg
gctatctgcttcgtcttcatgttcttctggagccagagcaaggggcaaatcaaacacaca
gccaccatcgactatgtgccccgtacctcaatgggggtaggaggaggaggaggggggagg
gggtggaggggatgctggcaagtttaccatgaagcttatctaaggttatgtgggagagaa
cttgggacacattga
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