Oncorhynchus tshawytscha (Chinook salmon): 112229327
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Entry
112229327 CDS
T05605
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 3-like
KO
K22654
immunoglobulin superfamily DCC subclass member 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112229327
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
PUNC
112229327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Sp38
Adeno_E3_CR2
Pur_ac_phosph_N
Hanta_Gc_C
Syndecan
Motif
Other DBs
NCBI-GeneID:
112229327
NCBI-ProteinID:
XP_042165759
LinkDB
All DBs
Position
LG31:complement(12521487..12557697)
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AA seq
749 aa
AA seq
DB search
MDPAVQRQLTYTILQYYSRHIIKAQARPQMEAVVLSHNVCGAKELAILLEPSDVIAVRDR
PLMLDCRVEGEGSISITWRKNGVPVVMGERVQVLPNGTLFIQSFQKRLDRVGSETDVGEY
DCAAQNRFGMLVSRKARVQLASLPKFHTHPESMSVDDGGVARFKCQVNSVPEANITWERD
RTPLTTTDNRYTLLPMGILQVTGVRRIDAGVYRCKASNIANTRFSHEAVLNVTGEASRIY
KEPVILSGPQNLTITVHQTAILECIATGNPRPIVSWSRLDGRSIGVEGIQVLGTGNLMIS
DVSLQHSGVYVCAANRPGTRMRRTALGRLVVQAPPEFMQWPQSVSKPAGGSAVFTCVAQG
VPEPHLIWLKNGKILMPGDNVKLTNNNSTLAVTRITSEDEAIYQCIAENMAGTNQASARL
AVSLAKDLPDSPQGLTATALSSSALQLAWIQPPVEITDGIIGYVLHIRKISEPDSRELQE
AVSKTTFQHDFTNLEPATTYSIYLKAYSPLGASQQSSTVVATTLGGVPSPPTFFTKVVNS
TAVQVLWELPSKPGKAEGFRLTYRRVPHADFQGPVQFPCHVNAHTISRLETGAVYEVKLV
AYNGNGESDCSKRLVSLAEEGSSAKTSGENQCTCRQESEGSMGGIVVGIHIGMACIIFCV
LFLMFGYRHSLFCSKGTQYSWSVPRGEDRGQLGQNGIPKEGVSRPVEVTLELVPQSRDTT
CHGGGPVRPAQCQVLIEQHSSGLPGMGTG
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgcggtgcagaggcaactcacatacaccattctacagtactactcccgacac
atcataaaagcccaggccaggcctcagatggaggcagtagtactctcacacaatgtatgt
ggtgccaaggagctggcgatcctattggagcccagtgacgtcatcgctgtgcgggatcgg
ccgctgatgctggactgccgggtagagggcgagggttccatctcgatcacgtggcgcaag
aatggggtgcccgtagttatgggggagcgtgtacaggtgctgcccaatgggaccctcttc
atccagagcttccagaaacgactagacagagtcggaagtgagacggatgttggagagtac
gactgcgccgctcagaaccgctttggcatgctggtcagccgcaaggcccgggttcagctg
gcatccctccctaagttccacacacacccagagtccatgtcagtggacgatggcggtgtg
gctcgcttcaagtgccaggtcaatagtgtgccagaggccaacatcacttgggaaagggac
agaaccccactcactactaccgacaacaggtacactctcctgccaatgggtatcctccag
gtgactggtgtgaggcggattgatgccggggtgtatcgttgtaaggcctccaacatcgcc
aacacacgcttcagccatgaggctgtgctcaatgtaaccggtgaggcttccaggatctac
aaggagccagttatcctctctgggccccagaacctgaccatcaccgtccaccagacagcc
attttggagtgcattgccacagggaacccccggcccattgtgtcctggagcaggctggat
gggcgctccatcggggtggagggcatccaggtgttgggcactggaaacctgatgatctcg
gacgtgtcactgcagcactcgggggtgtacgtgtgcgccgccaaccgccccgggaccagg
atgaggcgtactgcactgggaagactggtggtgcaagctccccctgagttcatgcagtgg
ccgcagtctgtctcaaaaccagcgggaggcagtgctgtgttcacctgtgtggcccagggc
gtccccgagcctcacctcatctggctgaagaatggcaagatcctgatgcccggtgacaat
gtcaagctcaccaacaacaacagcaccctggccgtgacgcgcatcacctcggaggacgag
gccatctaccagtgcatcgctgagaacatggccggcaccaaccaggctagcgcccgtctg
gccgtgtccctggccaaggatctgcccgactccccccagggcctcacggccaccgccctc
tcctccagcgccctgcagctcgcttggatccagccgcccgtagagatcaccgacggcatc
atcggctatgtgctccacatccgcaagatcagcgagccagacagtagagagctgcaggag
gcagtcagtaaaaccaccttccagcatgacttcaccaacctggagccagccaccacctac
tccatctacctcaaggcctactccccactgggtgccagccagcagtccagcactgtggtg
gccacaacactagggggcgtgccctctccccctaccttcttcaccaaggtggtgaactcc
actgcagtccaggtgctatgggagctccccagcaagcctggcaaggcagagggcttcagg
ctcacctaccgcagggtcccccatgccgacttccaggggccagttcagttcccttgccac
gtcaatgcccacaccatctcccgccttgaaaccggcgcggtgtatgaagtcaaactagtg
gcctataacgggaacggcgagagcgactgctccaagaggctggtgtcactggcagaagaa
ggcagcagtgccaaaaccagtggggagaaccagtgtacctgtagacaggagagcgagggc
tcgatgggtggtatagtggtgggcattcatatcggcatggcctgcatcatcttctgtgta
ctcttcctcatgtttgggtaccgtcacagtttgttctgcagtaaagggactcagtacagc
tggtctgttccaagaggggaggaccggggacagctgggacaaaacgggatccccaaagag
ggggtcagtcgtcctgtagaagtcaccctggagttagtgcctcagagtcgtgacaccacc
tgtcatggggggggtccggtgcgtccggcccaatgccaggtcctcatcgagcagcactcg
tctggtctgcctggcatgggcacaggctaa
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