Oncorhynchus tshawytscha (Chinook salmon): 112229436
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Entry
112229436 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase MYLIP-A
KO
K10637
E3 ubiquitin-protein ligase MYLIP [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229436
04121 Ubiquitin system [BR:
otw04121
]
112229436
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112229436
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
112229436
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112229436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_N
FERM_M
zf-C3HC4_3
FERM_C
Prok-RING_4
TerY_C
Motif
Other DBs
NCBI-GeneID:
112229436
NCBI-ProteinID:
XP_024251028
LinkDB
All DBs
Position
LG31:complement(29535333..29575979)
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AA seq
485 aa
AA seq
DB search
MLCHITRPDSVVMEVEVDTKANGEDCLNKVCRKLGILEVDYFGLQFSGNKGENLWLNLRN
RICQQVDNLTPCRLRLRVKFFVEPHLILQEQTRHVFFMQVKENLHSGHLRMCSEQAEELS
ALLAQAEFRDYNQNTAKYWYSKLCGSEPCPATVNSIISKHKALEGQSPGSVEYQALQLVS
SLEHYGVEWHWARDAEGQRLAIGVGPEGIAVCKEDFSLVNRISYPIIQTATQSGKSVYLT
VTKDTSDSVVLLFKLISNRAASGLYRAITETHAFYRCDTVTSAVMMQYSRDFKGHLASLF
LNENINLGKKYVFDIRRTSKEVYDYARRTLYNAGIMAAVGERTPSGLSPLRGQEEGLGED
CGSCQQSRALLERLEKLREALLCMLCCVEEIDSAFCPCGHMVCCQTCANQLQSCPVCRSE
VEHVQHVYLPTCTSLLNFTTTSHHGDDSPGPIHRAMCGLGHTCHTKDYCNTNTRHDSNNI
YHTET
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctttgccatattacccgtccggattcggtggttatggaagtggaagttgatacgaag
gcgaatggtgaagactgtctgaataaggtgtgtaggaagttgggaatcctagaggtggac
tactttggcctgcagttctcaggcaataaaggagagaacctgtggctcaacctcaggaac
agaatctgtcagcaggtggacaatctgactccctgccgactccggcttcgagtcaagttc
tttgtggaaccacatctgatactccaggaacagacgagacatgtgttcttcatgcaggtc
aaggagaacctccacagcggccacctgaggatgtgttcggagcaggctgaggagctgagt
gccctgctggcccaagctgagttcagagactacaaccagaacacagccaagtactggtac
tctaagctatgtgggagcgaaccctgcccggcaacagtcaacagtatcatctctaagcac
aaggcgttggagggtcagagcccggggtcggtggagtaccaggccctgcagctggtgtcc
agcctggagcactacggggtggagtggcactgggccagggacgcagagggacagaggctg
gccataggggttggccctgaaggtatcgctgtctgtaaagaggacttcagcctggtcaac
aggatcagctatcccataatacaaacagccacccagtcagggaagagtgtttacctgacg
gtgaccaaggataccagcgacagtgtggttctgctattcaagctgatcagcaaccgggca
gcaagcggactgtaccgggccatcactgagacacacgccttctacaggtgtgacacggtg
accagcgcggtgatgatgcagtacagccgtgacttcaagggtcacctggcgtctctcttc
ctcaatgagaacatcaacctgggcaagaagtacgtcttcgacatccgacgcacctccaag
gaggtctacgactacgcacgccggacgctctacaacgccggaatcatggcggcggttggc
gagaggacgccatcggggctcagtccactgcgtggccaggaggaggggctgggagaggac
tgtgggagctgtcagcagagcagggcgctgctggagagactagagaaactcagagaagct
ctgctgtgtatgttgtgctgtgtggaggagatcgactcagccttctgcccctgtggacac
atggtgtgctgccagacctgcgccaaccaactacagtcgtgtccggtgtgtcggtcggag
gtggaacacgtgcagcatgtctacctccccacctgcaccagtctcctgaacttcaccacc
acctctcaccatggcgacgacagccccggtcccatccacagagctatgtgtggtctagga
cacacctgccacaccaaggactactgcaacaccaacacccgacacgactccaacaacatc
taccacacagagacatag
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