Oncorhynchus tshawytscha (Chinook salmon): 112229438
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Entry
112229438 CDS
T05605
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112229438
03041 Spliceosome [BR:
otw03041
]
112229438
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112229438
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112229438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
RRM_1
KH_Vigilin
KH_DEAH11
Motif
Other DBs
NCBI-GeneID:
112229438
NCBI-ProteinID:
XP_024251030
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Position
LG31:complement(25420934..25457925)
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AA seq
629 aa
AA seq
DB search
MNKLYIGNVSEEASAEDLETIFEQWKIPHSGPFLIKTGYAFVDCPDEKIAMMAIDILSGK
VELHGKLIEVEHSVPKRQRSCKLQIRNIPPHLQWEVLDGMLAQYGTVENCEQVNTDTDTA
VVNVRYGAKDQARQAMEKLNGFLMENFALKVSYIPDETAAAAAPTLGGGKRGFVPRGPLR
SGSPGLGARPKLQSDVPLRILVPTQFVGAIIGKEGATIRNVTKQTHSKIDIHRKENAGAA
EKPITVHSTPEGCSNACRTIMEIMQKEALDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK
KIEVDTETKITISPLQDLTLYNPERTITVKGSIEACSRAEEEVMKKVRESYENDVAAMNL
QSNLIPGLNLNALGLFPGGAPGMGPSMGHNAPPPGAQGGYSSFGSSYFGGEGPFWASVLS
ASSQPLSGQGQPESETVHLFIPALAVGALIGKQGQHIKQLSRYAGASIKISADELRVVDA
NQVAPPDGMDAKQRMVIIAGPPEAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFA
AGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDQVIVKITGHFYASQLAQRKIQEILS
HVRRQQQPKPSPRGEGPPRGDGLARPSRK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctgtacattggaaacgtgagtgaagaggcgagtgccgaggacttggaaact
atctttgagcagtggaagattccgcacagtggtccgtttctcatcaaaactggttatgca
ttcgtggattgccccgatgaaaaaatagcaatgatggccatcgacattctttcaggtaaa
gttgaactacatggaaaactcatagaagtggagcactcggtccctaaacgtcaaaggagc
tgtaagctgcagatcaggaacatcccgcctcatctgcagtgggaggttctggatggcatg
ttggctcagtatggcacagtggagaactgcgagcaagtaaatacagacacagacacggca
gtggtcaacgttcgatacggtgccaaggaccaggccagacaggcgatggaaaagctgaat
ggcttcctgatggaaaactttgccctgaaggtgtcgtacatccctgacgagacggcggca
gctgccgccccgaccctgggagggggtaagaggggctttgtcccccgtggccctctgcga
tcgggttccccaggcctgggggcgcgccccaaactgcagtcggacgtccctttgcgcata
ctcgtccccacacagttcgtaggagccatcatcggcaaggaaggagccacgattcgcaat
gtcacaaaacagacacactcaaagatcgacatccacagaaaggagaatgcgggagcagca
gagaagcccatcacggtccactccaccccagagggctgctccaatgcctgcaggaccatc
atggagatcatgcagaaggaggccctcgacaccaagtttactgaggagattccattgaag
attctggctcacaacaactttgtgggccgactaatcgggaaggaaggacggaacctaaaa
aagattgaagtggacacagagaccaagatcaccatctcccctctccaggacctgactctg
tacaaccctgagaggaccatcacagtgaagggttccatcgaggcgtgctcccgcgctgag
gaggaagtgatgaagaaggtcagggagtcgtatgagaacgacgtggccgcaatgaacctc
cagtctaacctgattccaggactcaacctgaatgccttgggtttgttccctggtggtgct
ccaggtatgggcccctccatgggacacaacgccccacctcccggtgcccagggtggctac
tcctccttcgggagcagttacttcgggggcgaagggccattttgggcgtctgtgctgtcg
gcgagcagccagcccctctctggccaggggcagccggagtcggagacagtccatctgttc
atcccggcgctggcggtcggagcgctcattggaaaacagggtcaacacatcaagcagctg
tcgcgctacgccggagcctccatcaagatcagtgcagatgaactccgtgtcgtagatgca
aaccaggtagcacctccagacggcatggacgccaagcagaggatggtgatcatcgcggga
ccaccagaggcccagttcaaggctcagggtcgtatctttgggaagctaaaggaggagaac
ttctttgggccgaaggaggaggtgaaactggaggctcacatcaaggtgccctccttcgct
gctgggcgtgtcatcggcaagggaggcaaaacggtgaatgagctgcagaacctgaccagt
gctgaggtggtggtccccagagaccagacgcctgatgagaatgaccaggtcattgtcaaa
atcactggccacttctatgcaagccagctggcccagaggaagatccaggagatattgtcc
catgtgagacggcaacaacagccaaaaccctcgccccgtggggaggggccgccccgtggg
gacgggctcgcccggccctcccggaagtag
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