Oncorhynchus tshawytscha (Chinook salmon): 112229440
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Entry
112229440 CDS
T05605
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112229440
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112229440
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112229440
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112229440
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112229440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
GRP
Spem1
Motif
Other DBs
NCBI-GeneID:
112229440
NCBI-ProteinID:
XP_024251035
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All DBs
Position
LG31:complement(25471356..25477551)
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AA seq
322 aa
AA seq
DB search
MSDLEDGHFDGRDSRSPSKSDRGSPVRVKSESRSGSPSPSRVAKHSESRSRSKSRSHSRR
HSNRRYSRSRSPTNRKKSRSYSPEYRKKKSQSASPNRRHPSSRSHDFRKETFSQGAGGGE
DARANPDPNQCLGVFGLSLYTTEKDLREVFGRYGPLAGVNVVYDQRTGRSRGFAFVYFER
IADSKEAMERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTHNGGGGERNNGGGSGG
GGRRGRDSYDRYDDRRGGGYDRGYDRGYDRGDRGYDRYDEYDKYSRRRSPSPYYSRYRSR
SRSRSYSPPHWNRADRERCQAN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacctagaggatggacactttgatggacgagactctcgctccccatccaaatcg
gaccgtggcagtcctgttcgggtcaagtcggagagcagatccgggtcgccgagcccatcc
cgggtcgccaaacactcagagtctcggtcccgctccaagtccaggtctcactctcgtagg
cactctaaccgccggtacagccgctctcgctcccccaccaaccggaagaagtcccgctcc
tacagcccggaataccggaagaagaagagccagagtgcatcacctaaccgccgccacccc
agcagcaggagccatgacttcagaaaagagacattcagtcagggagcgggaggtggtgag
gatgccagggcgaaccctgaccccaaccagtgtctgggggtgtttggcctgagcttgtac
accacggagaaggacctgagggaggtatttggccggtacggccctttggctggggttaat
gtggtctacgaccagcgcaccgggcgctcccgtggcttcgccttcgtctacttcgagagg
atcgccgattccaaggaggcaatggagcgggccaacggtatggagctggatgggagacgc
attagagtggacttctctatcaccaagagggcccacacccctacgcctggtatctacatg
ggccgacccacgcataatggtggtgggggggagcgaaacaatggtggtggcagcggtggt
ggagggaggaggggacgggactcgtacgaccgatacgacgatcgacgtggtggcgggtac
gaccgtggatacgaccgtggatacgaccggggagaccggggatatgacagatatgacgag
tatgacaagtacagtcgcaggcgctctccctcaccctactacagtagatacaggtcacgc
tccaggtctcgctcatacagcccaccacattggaacagagcggatcgggagcgctgtcaa
gccaactga
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integrated database retrieval system
