KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112229448
Entry
112229448         CDS       T05605                                 
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137  Mitophagy - animal
otw04144  Endocytosis
otw04145  Phagosome
otw04148  Efferocytosis
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112229448
   04145 Phagosome
    112229448
   04137 Mitophagy - animal
    112229448
   04148 Efferocytosis
    112229448
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112229448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112229448
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112229448
   04031 GTP-binding proteins [BR:otw04031]
    112229448
Membrane trafficking [BR:otw04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    112229448
 Endosome - Lysosome transport
    112229448
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112229448
  Exosomal proteins of other body fluids (saliva and urine)
   112229448
  Exosomal proteins of colorectal cancer cells
   112229448
  Exosomal proteins of bladder cancer cells
   112229448
GTP-binding proteins [BR:otw04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    112229448
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 112229448
NCBI-ProteinID: XP_024251047
UniProt: A0AAZ3QJK0
LinkDB
Position
LG31:complement(24935841..24947789)
AA seq 216 aa
MANRGGATRPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARARNWVKELQ
RQASPNIVIALSGNKADLASKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPAATGANSGRNRGVDLTEAAQPTKAPCCST
NT seq 651 nt   +upstreamnt  +downstreamnt
atggccaacaggggaggagctacgagacccaacgggtctaacgctggtaacaagatctgc
cagttcaagctggtacttctgggggagtcggcagtgggcaagtccagcctggtgctccgc
ttcgtcaagggacagttccacgagttccaggagagcaccattggagcggccttcctgacc
cagacagtgtgtctagacgacacgacggtgaagtttgagatctgggacacggcaggacag
gagcgctaccacagcctggcgcccatgtattacagaggggcacaggccgccatcgtggtc
tacgacatcacaaatgaggagtcatttgcgcgggccaggaactgggtgaaggagctgcag
agacaagccagccccaacattgtcatcgccctgtctggcaacaaggctgacctcgccagc
aagagagccgtggacttccaggatgcccagtcatatgcagacgacaacagcttactcttc
atggagacgtcggccaagacgtctatgaatgtgaacgagatattcatggctattgcaaaa
agattgcccaagagcgagcctgcggccacaggagctaacagcgggcggaacaggggcgtc
gacctaacggaagccgcccagccaactaaggccccctgctgcagtacttaa

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