Oncorhynchus tshawytscha (Chinook salmon): 112229478
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Entry
112229478 CDS
T05605
Name
(RefSeq) 26S proteasome complex subunit SEM1
KO
K10881
26 proteasome complex subunit DSS1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03050
Proteasome
otw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112229478
09124 Replication and repair
03440 Homologous recombination
112229478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112229478
04131 Membrane trafficking [BR:
otw04131
]
112229478
03051 Proteasome [BR:
otw03051
]
112229478
03400 DNA repair and recombination proteins [BR:
otw03400
]
112229478
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
112229478
Membrane trafficking [BR:
otw04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
112229478
Proteasome [BR:
otw03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
112229478
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112229478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSS1_SEM1
Motif
Other DBs
NCBI-GeneID:
112229478
NCBI-ProteinID:
XP_024251108
LinkDB
All DBs
Position
LG31:complement(24139832..24152818)
Genome browser
AA seq
70 aa
AA seq
DB search
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGSKMETS
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaagaaacagactgtggatttgggattattagaggaggacgatgagtttgaa
gaattcccagccgaggattggacgggtctggatgaggatgaagatgcccacgtgtgggaa
gacaactgggatgatgacaacgtagaggatgacttctctaatcaactccgagcggagctg
gagaaacatggttccaagatggagacgtcgtag
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