Oncorhynchus tshawytscha (Chinook salmon): 112229479
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Entry
112229479 CDS
T05605
Name
(RefSeq) lamin-A
KO
K12641
lamin A/C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04210
Apoptosis
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112229479
09142 Cell motility
04820 Cytoskeleton in muscle cells
112229479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112229479
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
112229479
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
TPR_MLP1_2
ATG16
Crescentin
GBR2_CC
Zn_ribbon_SprT
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
112229479
NCBI-ProteinID:
XP_024251112
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All DBs
Position
LG03:complement(19317903..19341459)
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AA seq
683 aa
AA seq
DB search
MSTMETGQKRTSRGGATTQLTPTRISRLQEKDDLCNLNDRLAVYIDKVRSLEIENAGLRM
RITESDTEISREVTGMKAAYETELADARKTLDSVAKERARLQLELGKVKEEYKELKVRNG
KKESDLEAALARLRDLEALLNSKDASLSTALGEKRSLDAEVRDLKAQLAKLETGLSDAKK
QLQDEMLRRVDAENRLQTLKEELQFQKNIYGEELRESKRRHESRMVEIDSAGTKQDYESK
LAEALIELRAQHEEQVRIYKEEIEKTYTSKLENARHSADRNSTLVGAAHEELQQTRVRME
GMSSQLSQLQKRLAASEARVRELEESLARERDMMRRRLEDKEREMGDMRMRMQQQLDEYQ
ELLDIKLALDMEISAYRKLLEGEEERLRLSPSPPPTRVTVSRTTGSGSGHTLTTRTSGSG
HTLTTRTSGSGHSHSGRMIQSTSGSRNSSGTASAKKRRLNDNDSETSSLAGGAVTRTRIA
QQASASGRVTVDEVDLEGKFVRLSNKANEDQLLGHWQVKRQVGSSTPIVYKFPPKFNLKA
GQTVTIWASGAGGTHNAPSDLVWKTQSSWGSGDLFQTTLISANGEEMAQRKVTRTLFQED
DDDDGNHSVCGVDSEYNLRSRTVVCGSCGQPSDKSCATSGVSSGSCSVSSGGGLPEGLMS
PLFIMGSNSPRQGGPRPENCSIM
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtccactatggaaacgggtcagaaacgaaccagccgcggcggagccaccacccagctc
accccaactcgcatttcccgcctgcaggagaaggacgacctgtgcaacctcaacgaccgg
ctggccgtctacatcgacaaggtgcgctcgctggagatagagaatgctgggctgcggatg
cgcatcaccgagtccgacaccgagatcagccgtgaagtgacgggcatgaaggcggcctat
gaaacggagcttgccgatgcccgaaagaccctcgactcggtggccaaggagcgcgcccga
ctgcagctggagctaggcaaagtcaaggaggagtacaaggagctcaaagtcagaaatggg
aagaaggagtcagacctggaggcagctctggcccggctgagggatctagaggctctgttg
aactctaaagatgcctctctgtccaccgccctgggggagaaacgctctctagatgctgag
gtcagggacctgaaggcccagctagccaagctggagaccggtctgagcgacgctaagaag
cagcttcaggatgagatgctgaggagagtggacgctgagaaccgcctgcagaccctcaag
gaagaactgcagttccagaagaacatctacggagaggagctgagggagtccaagcgcagg
cacgagtctcgcatggtggagattgacagtgcaggaacaaagcaggattacgagagtaag
ctggccgaggccctgatagagctgagagcccagcacgaggagcaggtccgcatctacaag
gaggagatcgagaagacctacacctccaagctggagaacgcccgtcactctgcagacagg
aacagtaccctggtgggggcggcccacgaggagctacagcagactcgcgtgcggatggag
ggcatgtcctctcagctcagccagctgcagaaacggctggcggcgagtgaggccagggtg
cgtgagctggaggagtctctggcccgggagcgggacatgatgcgccggcgcctggaggac
aaggagagggagatgggggacatgcgcatgcggatgcagcaacagctggatgaataccag
gagctgctggacatcaaactggccctggacatggagatcagcgcctaccgtaaactgctg
gagggagaggaggagagactgcgtctgtcccccagccctcccccaacccgagtcaccgtg
tcccgtaccaccggctcgggctcaggacacacacttaccactcgtacctcgggctcagga
cacacacttaccacccgtacctcgggctcaggacacagccacagcggccgcatgatccag
tcaaccagtggcagccgcaactcctcaggcacggccagcgccaagaagaggcgtctcaat
gacaacgacagtgagacctccagcctggcggggggtgccgtgacgcgtacacgcatcgcc
cagcaggcctccgcaagcggccgcgtcaccgtggacgaggtggacctggaggggaagttc
gtccgcctcagcaacaaggccaacgaggaccagctcctgggccactggcaggtgaagaga
caggtgggcagcagcacccccatcgtctacaagttcccccccaagttcaacctcaaggca
ggacagaccgtcacaatttgggcttcaggagcaggcggcacccacaacgccccctcagac
ctggtgtggaagacccagagctcatggggcagcggagacctgttccaaaccaccctgatc
agcgccaatggggaggaaatggcacagaggaaagttacacgcaccctgttccaggaagat
gatgacgatgacggaaaccacagtgtgtgcggtgtggacagtgagtacaacctgcggagc
cgcacggtggtctgtggctcatgtggccagccgtctgataagagctgtgccacctcaggg
gtgtccagcggctcctgctccgtcagcagtggaggaggtctgcctgagggcctgatgtct
cctctcttcataatgggcagcaactcacccagacagggaggtcccagaccggagaactgc
tccatcatgtaa
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