Oncorhynchus tshawytscha (Chinook salmon): 112229491
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Entry
112229491 CDS
T05605
Name
(RefSeq) F-box/LRR-repeat protein 2 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112229491
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112229491
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
F-box
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box_4
Motif
Other DBs
NCBI-GeneID:
112229491
NCBI-ProteinID:
XP_042166215
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All DBs
Position
LG31:30466815..30495363
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AA seq
432 aa
AA seq
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MNGITKGRFEVFSNSDEAPINKKLPKELLLRIFSNLDVITLCRCAQVSKAWNVLALDGSN
WQKIDLFNFQTDIEGRVVENISKRCGGFLRQLSLRGCISVGDASMKTFSLNCRSIEVLNL
NGCTKITDSTCLSLSKFCCKLKQLDLTSCVSVTNHSLKALSDGCSMLETLNLSWCDQITR
DGIEALTRGCNNLQALFLRGCTQLEDGALKPLQKHCPELTTINMQTCSQITDDGLVSLCR
GCHKLQMLCISGCSNITDASLTALGLNCPRLKILEAARCSQVTDAGFTALARHCHEMEKM
DLEECVLVTDNTLVQLAIHCPRLQALSLSHCELITDDGIRALSSSVCGQERLTVVELDNC
PLITDGTLEHLKNCHRLERIELYDCQQVTRAGIKRIRAHLPEIKVHAYFAPVTPPPSVHG
GGHRLCRCCVIL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcatcaccaagggcaggtttgaggtgttttccaacagcgatgaagctcccatt
aacaagaagcttcccaaggagctgctgctcagaatcttctccaacctggatgtgatcaca
ttgtgcaggtgtgcccaggtgtccaaggcgtggaatgtcctggccttggatggtagtaac
tggcagaagattgacctgttcaacttccagacagacatagagggtagagtagtggagaac
atctctaagcgatgtggaggcttcctgaggcagctgagtttgaggggatgtatcagtgtg
ggagacgcatccatgaagacgttttccctgaactgccgtagcattgaggtgttgaacctg
aacggctgtactaagatcacagacagcacctgtctcagcctctccaagttctgctgcaaa
ctcaaacagctggacctcacctcctgtgtgtctgttaccaaccactccctcaaagctctc
agtgatggctgtagtatgttggagacattaaacctgtcgtggtgtgaccaaatcaccaga
gatggcatcgaggctctgaccaggggctgtaacaacctacaagccctgttcctacgtggc
tgcacacagttggaggatggagcactgaaaccccttcagaaacactgtcctgaactaacc
actatcaacatgcagacctgctcacagataactgatgatggcttggtcagcctgtgtcgg
gggtgccacaaactgcagatgctgtgtatctctggctgcagtaacattacagacgcctct
ctcaccgctctgggcctcaactgcccccgactcaagatcttggaagcagcacggtgttca
caggttacagacgctgggtttactgcactggcccggcattgtcatgagatggaaaaaatg
gatttagaagaatgtgttttggtgactgacaacactctagtccagctcgctattcactgc
cctcgactgcaagcactgtccctctcccactgtgagctgataactgacgacggtatcagg
gcgctgagcagcagtgtgtgtggacaggagcgcctcacggtggtggagttggataactgc
cctctgatcacagacgggactctggagcacctgaaaaactgccaccgcctggagaggata
gaactctacgactgccagcaggtcaccagggccggcatcaaacgcatacgggcccatctc
ccagagataaaggtccacgcctactttgccccagtgacgccccctccctctgtgcacggt
gggggccataggctgtgtcgctgctgcgtcatcctctga
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