Oncorhynchus tshawytscha (Chinook salmon): 112229525
Help
Entry
112229525 CDS
T05605
Name
(RefSeq) ubiquilin-4
KO
K04523
ubiquilin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112229525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229525
03051 Proteasome [BR:
otw03051
]
112229525
Membrane trafficking [BR:
otw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112229525
Proteasome [BR:
otw03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112229525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
Rad60-SLD
UBA
Ubiquitin_5
UBA_7
YukD
Rad60-SLD_2
UBA_HOIP
Dsc3_N
CUE
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
112229525
NCBI-ProteinID:
XP_024251175
LinkDB
All DBs
Position
LG03:complement(19395416..19401553)
Genome browser
AA seq
592 aa
AA seq
DB search
MAENSGTDPTVDSNVVENAASDETMIVVTVKTPKDKEEIAISEDSSVAQFKEEISKRFNA
KQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTAPKATVGGTSQSSASSSGTPQAN
SSVNPSAAPNDSTTPGTGSTPASTQPPNLLSGFGDLSSLSGMGMGSANFMEMQQQMQRQL
MSNPEMLSQIMDNPLVQNMMSNPDLMRQMIVTNPQMQQLMERNPEISHMLNNPELMRQTM
ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSAL
GGNLDSGVQPSRTENREPLPNPWGPPGTTPSEIRGTGASTTTTSSAGGTAPSASNPLGIN
ASGLGNGVFGSPGMQSLMQQISENPQLMQNMLSAPYMRSMMQSLAQNPDLASQAMLNNPL
FAGNPQLQEQLRHQMPVFLQQMQNPESLSVMTNPRAMQALMQIQQGLQTLQTEAPGLMPS
LAPGGIPVIPPTTGGSVAPENLPPPTQGSNPTAATNPSQQQQQLMQQMLQMFAGGGGSSS
TQTVTPEVRFQQQLDQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacagcggcacagatcccactgtggattccaacgttgttgaaaatgctgcc
tcagacgagaccatgatcgtggtcacggtaaaaactccgaaagataaagaggagatcgcg
atatcggaggattcttctgtcgcacagtttaaagaggagatatccaaaaggtttaatgcc
aagcaggaccagctggtgttgatttttgctggcaaaatcttaaaggatggagacacactg
aaccaacacggcatcaaggacggactcactgttcaccttgtcatcaagactgctcccaag
gctacagttggtgggacatcccagtcctctgcatccagctctgggaccccccaggccaac
agcagcgttaaccccagcgcagcgcccaatgacagcacaacaccaggcactgggtctacc
ccagcctccacacagccacccaacttactgagtgggtttggtgacctatctagcctgtca
ggcatgggcatgggctcggccaacttcatggagatgcagcagcagatgcagagacagctg
atgtccaacccggagatgctgtctcaaatcatggacaaccctttggtgcagaacatgatg
tccaacccagacctgatgaggcagatgattgtgacaaaccctcagatgcagcagctgatg
gagcgcaaccctgagatctcccacatgctcaacaaccctgaacttatgagacagaccatg
gagttggcaaggaacccagccatgatgcaagagatgatgcgtaaccaggaccgggcgctt
agcaacctggagagcatccctgggggctacaacgccctccggaggatgtacacagacatc
caggagcctatgttcagtgccgctagagagcagtttggaaacaatcccttctctgctttg
gggggcaacttggactctggcgtgcagccctccagaacagagaacagggagcccttacca
aacccctggggaccccctggaacgaccccctcagagatcagggggactggtgcctccacg
acaacaacctcctctgctggcgggactgcacccagtgcctccaaccccctgggcatcaac
gcctctgggctgggcaacggtgtgttcggtagccctggaatgcagagtctgatgcagcag
atctctgagaacccccagctgatgcagaacatgctgtctgcaccctacatgcgcagtatg
atgcagtcgctggcgcagaaccctgacctcgcctcgcaggcaatgctgaacaaccccctc
tttgccggaaacccccagttacaggaacagttgagacatcagatgccggtctttctccaa
cagatgcagaatcctgagtcactgtctgtgatgactaacccccgggccatgcaggctctc
atgcagatccagcagggcctgcagaccctacagacggaagcccccggactcatgcccagt
ttggctcctggtgggatcccagtgattcctccaaccacaggaggcagtgtggccccagaa
aatcttcctcccccaacacagggctcaaatcccactgctgccactaacccatcccaacag
cagcagcagctcatgcagcagatgttacagatgtttgctggaggaggaggcagctcatcg
acccagaccgtaaccccggaggtgcggtttcagcagcagctggaccagctcagcgccatg
ggcttcatcaaccgcgaggccaacctgcaggccctcatcgccacggggggagacatcaac
gctgccattgagagactgctgggctcccagccctcctaa
DBGET
integrated database retrieval system
