Oncorhynchus tshawytscha (Chinook salmon): 112229533
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Entry
112229533 CDS
T05605
Symbol
dennd3a
Name
(RefSeq) DENN domain-containing protein 3 isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229533 (dennd3a)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112229533 (dennd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
WD40
DUF5074
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
112229533
NCBI-ProteinID:
XP_024251182
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All DBs
Position
LG31:complement(20731316..20777039)
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AA seq
1313 aa
AA seq
DB search
MADIPSGLLEACVVVGAANEKLREVHQSHQQGKIKELPLLGAEVLQVHAPPFVTKESASS
ETHGHAPAFSRVQRRRSFIKKKKERAGIANGETAKGSDGGGGTTTEDISVPKDLDLIALP
QLCFPGGLQIASEQREDSYHYLVFTDVFGNRTHAVVVQYYRPIQFFQDVGHQNGHLSSSK
SSRLYTAYGICVISKYPYYNALRDCLSCLLTQLKPSWMGDFEERVKEFSAKLALVPIPPP
GQLHVVFNLRPLQIGLPSREDKDRPAIDLDLHLPFLCFRPRQLLQIITSLLIEQRVVLLS
CDWARLTLLAESLMLFIHPLVWQHPFVPILSRQMLDFLMAPTAYLMGCHLHHYAEVAAEV
AAETDDLILVNIDDGTVSSSWSDGIDLPDVPLAAAECFITRVEGLQVHYDLEVCHLGDST
EVNARRAQRKQWQSKLNTHIQNITLELIVNIFREVHDHLNYEHRVFNSEEFLKSREPADQ
PFYKKVLDTHIFHSFLRDRLTRKMDAFTRMELSTRTEAYRLRSMTESPRRPTMQELARKY
TSPESRLSKRLGASLPNLGESGASLAGPLRQTSFKNIQVDSGMKSPQRPVRFFKLPEFPP
PLAYHYVQNYYQEMITLLGKAISGVASGDSSLLARYHYLRGFVNTVAGKRLDALEDFQNL
YKTDTDIFPGELVNALVDSLQEGEQALADRRPEIKHLISRVKRDHERERARHVDEGVKRF
QLPKKHMQLEDFVRHVQESGIVKDQGTIHRLFEALTVECCKSSLGWHGGGGGSAVKASSQ
SIFYLDSNLEGQQKQVDPEIFRVFYTFWKETEAEAQEVALPASALEHLEANECVFKLSSS
VKTSHGVGKIAMTQRRLFLLTEGRPGYMEVTKFRDIEEVKISSAPFLLLRIPSLKIKTTL
RKETFEVNLKSEVDLWHLMVKEMWAGRKMADDHKDPQYMQQALTNALLMDAVVGCLQSQK
AIFAATKLAHFDRMKLEVPLMVPKSTSETLKHKINPSLGLTSPQAVDVLLYTPGQLGVSS
DSEGDGNPKLWCALSDGKVVVFDAASWSMQQNQVQVGTSRVNCMLGVDRQQVWIGSQDSV
IYIISTRSMSCKQQLTDHRSEVTGLSLGERSEKYSPKVAYSCSAEGAVIVWDVSTLQVRK
RFRVSCDRLQSVQLCNGTLWCCARDCIMEVWKNGMLHRKISLPEQLCGSPTAFSSLLLYH
EREQLWTACIDVGELCVWHLREPTKPFQRIQLPDCAGVTCLIKVKNQIWVGGRGWSSGKS
RGKIYVVDAQRHTVEKELVAHTDCVQALCSAEDRYVLSGAAREDGKIAIWKVE
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggcagatattccctctggactgctggaggcttgtgtagtggttggagcagccaacgaa
aaactcagggaagtccatcagtcccatcaacagggcaaaatcaaagagcttcccctgttg
ggggcagaggtactgcaggttcacgccccaccttttgtgaccaaggagagtgcgagtagc
gagacccatggtcacgccccggccttcagcagggtccagaggaggcgctccttcatcaag
aagaagaaggagagggctggaatagctaatggagagacagccaagggtagcgatggagga
ggcggcaccaccacagaagacatcagtgtccccaaggacctggacctcatcgccctgcct
caactctgcttcccaggtggtcttcagatagccagcgagcagagagaagactcgtaccat
tacctggtgtttactgatgtctttgggaacaggacacatgctgtagtggtgcagtactac
aggcctatacagttttttcaggatgttgggcaccaaaatggccacctgtcgtcctccaag
tcgtcccgtctctacacggcatacggcatctgtgtcatctctaaatatccttactacaac
gctctccgggactgcctgtcatgtctcttgacccagctcaagcccagctggatgggggac
tttgaggagagggtgaaggagttttcagccaagctggcgctggtgcccattcccccacct
gggcaacttcatgtggtctttaacctcaggcctctccagattgggcttccctcccgggag
gataaggaccggccggctattgacctggacctccatctgcctttcctgtgctttagaccc
cgacagctcctccaaatcattaccagcctgttgatagagcagagggtagtactgttgtcc
tgtgactgggcccggctcaccctgctggcagagagcctgatgctcttcatccatcccctg
gtgtggcagcaccctttcgtgcccatcctctcacgccagatgctggacttcctcatggcg
cccaccgcctacctcatgggctgtcatctgcaccactatgcagaggtggctgcggaggta
gccgcggaaactgatgatctgatcctggttaatattgatgatgggaccgtgtcatcttcc
tggtctgatgggattgacctgccggatgtcccgctggcggccgcagagtgttttataaca
cgggtggagggtctccaggtgcactatgacctggaggtgtgtcacctgggggacagtaca
gaggtgaatgcgaggagggcccagaggaagcagtggcagagcaaactcaacacacacatc
cagaacatcactctggaactcatcgtcaacatcttcagagaagtccacgatcacctcaac
tatgagcacagagtcttcaacagtgaagagttccttaagtctagagagccagcagaccag
ccattttacaagaaggtgttggacacacacatcttccactcattcctaagggatcgtctg
accaggaagatggacgcattcacacgtatggagctgagtactcggacagaagcttacagg
ctgaggtccatgacagagtctccgcggcggcccaccatgcaggagttggcccgtaaatac
accagcccagagagccggctcagcaagaggctgggggccagcctgcccaacctgggggag
agtggggcgtctctggcggggcccctcaggcagacctccttcaagaacatacaggtggac
agcggtatgaagtctccccagaggcccgttagattcttcaagcttcctgagttcccccct
ccgctggcctaccactacgtccagaattactaccaggagatgatcaccctcctgggcaag
gccatcagcggggtggcctccggggactcctctctcctggctcgctatcactacctcagg
ggcttcgtcaacacagtggccggtaaacgcctggatgctctagaagacttccagaacctc
tacaagacagacacagacatctttcctggcgagctggtcaacgcgctggtggactctcta
caggagggcgaacaggcactggctgaccgccgacccgaaatcaaacacctgattagtcga
gtaaagagggaccatgagagggagcgggcgcgccatgtcgacgaaggtgtcaagcggttc
caactcccgaaaaagcacatgcagttggaggactttgtgaggcacgtgcaggagtctggg
attgtcaaagaccaggggaccattcaccggctgtttgaggctctcactgtggaatgttgt
aagagcagcttgggttggcatggtggtggtggtggctctgcggtgaaggcttcttcccag
tctatcttttaccttgattccaatctggagggccagcagaaacaggtggacccggagata
ttccgcgtgttctacaccttctggaaggagactgaggccgaggctcaggaagtggccctg
ccggcctcggccctggagcacttggaggctaatgagtgtgtcttcaagctgtcctcttcg
gtcaagaccagccacggcgtgggcaagatcgccatgacacagagacggctgttcctgctg
accgaaggacgacccgggtacatggaggtcaccaagttcagagacattgaggaggtgaag
atctcctctgctcccttcctactgctgaggatcccgtctttgaagatcaagaccaccctg
aggaaggagacgttcgaggtcaacctgaagtcagaggttgacctctggcacctcatggtc
aaggagatgtgggctggaaggaagatggccgacgaccacaaggacccccagtatatgcag
caggctctgaccaacgccctgttgatggatgcagtggttggctgtctgcagtcacaaaag
gccatttttgctgcaaccaagctggcacactttgacagaatgaaactggaagtcccgctg
atggtccctaaatccacgtcagagaccctgaagcacaagatcaacccttccctgggcctg
actagcccccaggcagtggatgttctgctttacaccccaggccagctgggcgtgtcgtct
gactctgagggtgatgggaaccccaaactgtggtgtgccctgagtgacgggaaggtggtg
gtgtttgatgcagccagctggtccatgcagcagaaccaagtccaagtgggaacttcacga
gtgaactgcatgctgggagtggaccggcagcaagtgtggattggctcccaggattcagta
atttacataatcagcacccgcagcatgtcctgtaaacagcaactgacagaccaccgcagt
gaggtcacagggctgtccctaggggaacgcagcgagaaatacagccccaaggtggcatac
tcctgcagtgcggagggtgcagtgatagtgtgggacgtgtccacgttacaggtcaggaaa
cggttccgggtctcctgcgaccgtctccagtccgttcagctctgcaatggaaccctatgg
tgctgtgccagagactgcattatggaggtgtggaaaaatggaatgttacatcgcaagatc
tcccttcctgagcagctctgtggctccccaactgccttcagcagcctcctgctctaccat
gagagggagcagctgtggacggcctgtatagacgtaggggagctgtgtgtgtggcacctc
agggagcccaccaagcctttccagaggatccagctgcctgactgtgcaggcgtcacctgc
cttatcaaggtcaaaaaccagatctgggttgggggccgagggtggagttcggggaagtcc
agggggaagatctacgtagtggatgcccagcgacacacggtggagaaggagctggtagct
cacacagactgtgtccaggcactgtgctccgcagaggaccgctatgtgctgagtggggca
gcacgcgaggacgggaagatagccatctggaaagtggagtaa
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