Oncorhynchus tshawytscha (Chinook salmon): 112229568
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Entry
112229568 CDS
T05605
Name
(RefSeq) zinc finger protein 40
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112229568
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112229568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_16
NOA36
Motif
Other DBs
NCBI-GeneID:
112229568
NCBI-ProteinID:
XP_024251258
LinkDB
All DBs
Position
LG31:complement(18477041..18563273)
Genome browser
AA seq
2692 aa
AA seq
DB search
MPRTKQNNPKNLKDKIEEAQNELKDTKAGAQKGINEGGRRSADNIKALKRKKVVAENQLK
KIPKSPVKKSLQSKTSVATLQAASSKEAAPSCSYPNSPSQNPASSPSQNRDTEYVQPNAE
SSEGVTSSIDNDRLKQRDTSFSKPQSLDPISGKEESVSGVGESQQLKDSKSGETSCEGDS
PYHASAPLEVLLRAMESDFSSLSEKNKSFPVTAVEKPGRTLSAQSNSEVNAMPAIHFGLQ
TQPAHMQNDFVNKQETYTMHSSTQAVPLQTLQLATQHFSNCGEKPGLQMSFSTGSSDTLT
HSPVPSGSNSLPRSQPPVVHTCQSLSASVPSTIQVPVTPGYNPAQMATVVNFGLEQMCSI
SAKDQKPKKQGKYVCEYCSRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHK
KSHAHAIKLGLVARSDSGSGSLSVESDKALGTHSDVEESGDSDEESSTADLDPDSSQSSV
AAFSESSLLSAGTTQGNHGDAGDPSAVFPLSQRGYESKGTASLPKVVVYPVNVSPQRADS
PRVTDSSPEQATAQRQKDFQTAHLRSSITVLSSLKEVDCTSPLHDAGSEDEDQQCRTPPG
GGHGQLQRQQATDFSQQQQGKCLLSPRSLGSTDSGYFSRSESADQAMSPPSPFVKITPPT
DMDVTKNVLPNLPAVVATAMHVASVEKPRVVQGQMRPPLETKALSLEERISKLISDNEAV
VDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPMARRSSSSSDIPKSPFTPTE
KSKPVFLLSVPNQYTPMDCLPITRSNSMPTTPGHSGLPPNIVQQPHPLRICQSFDDKMSS
LNDDVFSSAPSTPNPAIHSRTLVRQVAVEDFSTSEGLTSVRSMDEGYHGSSISTELMQRS
RSFEHAQDRNRKPLQSKGTMYECETCRNRYRKLENFENHKKFYCSELHGPKNKPVSVRET
EQDVFQHVMRQPLVPRTVISGIMDQQQSFRKRRKMKSVGDDDDQSPTDTNPPCSVSFDSC
QLSTASSGQPFSQHSIMVDLQPKSNPPQITQNQLVARGTDASESRLSPIRETQVNTSGKE
RGDLQRQGSGTSVIRHTNSLSKPNSFETSESIDRASPVDFMYKDGHSTGKTKTDATANLS
LESYHEKMSIPKCADQGKQGMENRVDSTLAAVAESCAAVQQSRLVRQNNIPEILVTEEPD
REHDGQSTEQGEKVADTFNWPQRSESLSKLPTEKLPPKKKRIRLAQMEHSSGESSFESSL
SRSLSRDSSLSRCSSISASFDRDEPSRSESPSRGEFVNKISEHQGLPIAFNTLGVPGMIR
RAASEQISCTQPSVEILCDYRSKSFDFGSVSPSRSLPPNRSMSPMELPTSVQAFPSVQVP
LIERRRGPLVRQMSLKIGPESQQHVGRHAIPLQRLPTVFSTSQQRPQQTTNKPPLAQPFI
VHCGETLPQKNERMVQSINLGSHGQLPQIHGLPPPWHLTSRVQTCQNIQQSVVHVVVGQE
DAQNNSADSQDKSFVPKYQLQCPALRPSQTYSLSTTQGTQTTLPVLTIPIANQMQSILKS
SDVLHNVCVAQPCFQIVSNKTQSIVLPVSLQNDPPSQNLPGALQLPQILITHEQMHPSLS
VTSNLYVVDTDTKTVPEMNKDRTPASTSLQVKHSLVSNTQNHIGEIQRAPSLGSLHCTQK
MAAVTLCPQQEPIASSKRMLSPANSLDIAMEKHQKRAKDEHGAACLTDGRSVNYLNSKMA
EVTRQRKLMLVRQVCTTEPVDSPIETEAPPLQHEKPVGEKDAQTPKNCKTITPDCTGKDE
PSSVVPQEQPRSALNTTPGSHVSSSVLANASLKPQDKSEEERWSPAKSPIRPSTFHGQVK
LASSVSVVNTRDSHRLSFPSLKTATTFTWCYLMKRRPLHVPQTDQKVSAYSTWAVSPNNP
NPLGLPTKVVMSLFDSKQNSKKIHYTEAITTSMKSDILAYSSKLKDVMPKVLKPQKTENN
SKVQPESQVSSESDKDSSSSKIEPRRVKIFDGGFKSNEDYVYVRGRGRGKYICEECGIRC
KKPSMLRKHIRTHSDVRPYHCTHCNFSFKTKGNLTKHMKSKAHSKKCMEMGVSAGLEDHD
TEDSGDRSQVGSTDRPDSDGEDSEGADDDNDDDNEEEEEDSQAESGLSTNPSVSASPQHI
PSSLQAELPPSSLLAQMSIHHHHPAPLSLPQLPTSDSHTHHTHDASDTESVPMLSPVSLV
KQMSISGGCSSPGPLPYSPPPHTSDTESVHMMSPVSPCRQMSIDYPDVDVPPSPPVPGKG
CSKLGQDGSLAAPTLPTSEPGVPFGTDVSTQTASFTPQTSSYSPWHFPSQGPTQGSGATQ
GGHTHLFSHLPLHSQQPSCSSYSMVPVGGIQLVPAGLPAYSTFVPIQAGTVQLTIPAVSV
IHRNTSPLPFPKSSNSPQPEGSVLTPTNQPLVVQEPISSIMPCFPLGQVTGLQALGASQQ
MLQSMGLETLNVMGLTSSGALTSTQLLSQHGLTLNATLGLQALTASPSSQSSTGPHHHHT
HHTPIPGLQILNIALPALIPSLSPLSALSPLPGPSERQGSPEAQGATPLSSQTELGPLVS
CPSVASSLPTATMRGSPAQEMTSSGSRPSSSGHRSSGGSDHTQTPGKEGRVTTSLPQPSP
APAAEGVVERAGGASEPVMPRRQSMLSRQQVTEDFIDDSASSDDEDRLVIAT
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaccaagcagaacaacccgaagaaccttaaagataaaatcgaagaagcacag
aatgaactgaaagataccaaagccggcgcacagaaagggatcaatgagggtggtcgaaga
agtgcagataacataaaggcactgaagaggaaaaaggttgtggcagaaaaccagctgaag
aaaatacccaaatctcccgtaaagaagtccttgcagtccaagacctccgtggcaacactc
caagctgcctcgtccaaggaagccgcaccctcttgctcctaccccaacagcccttctcaa
aaccctgccagctcaccaagccagaaccgagatacggagtatgtccagcctaatgctgaa
tcctctgagggagtgacatcctccattgacaatgataggctaaagcagagggatacgtcc
ttctcaaagccacagtctctcgatcccatcagtggtaaagaggaatctgtctctggtgtt
ggggagtctcagcagctcaaggacagtaagagtggcgaaacaagctgtgaaggtgactct
ccttaccatgctagcgctccccttgaagtcttgctcagggctatggaatcagacttcagc
tccttgtcagaaaagaacaaatcctttccagtcacagccgttgaaaaacctggccgaact
ctttctgctcagtctaatagtgaagtaaatgctatgccagctatacattttggactgcaa
actcagcctgcgcatatgcagaatgactttgtaaataaacaagagacctacacaatgcac
tcctctacccaggctgttcccttgcagactttgcagcttgctacacagcatttcagcaac
tgtggggaaaagcctggcttgcagatgagcttcagtactggctcctccgataccctaact
cattcacctgttccctcaggctccaattccttgcctcggagccagccgccggtggtgcac
acatgccagtccctatcggctagtgtccctagcaccattcaagtccctgttacacctggt
tacaacccagcccagatggccacggttgtgaactttgggcttgaacagatgtgtagcatc
tcagcaaaggaccagaagcctaagaagcaggggaagtatgtgtgtgaatactgcagtcgg
gcatgtgcaaagcccagtgtgttactcaagcacatcaggtctcacacaggagagcgtccc
tacccatgtgttacttgtggcttctcattcaaaactaagagcaatttgtacaagcataag
aaatcccatgctcacgcaataaaactggggcttgtggcgcgttctgactctggaagtggg
tccctctccgtggagtctgacaaagcacttggaacacattcagatgtggaggaaagtggg
gacagcgatgaggaaagtagcacagcagacctagaccctgactcatcacaaagcagtgtt
gcagcgttctctgagagcagtttgctgagtgcaggcacaacacaaggcaatcatggggat
gcaggggacccatcagctgttttccctctgagtcagaggggctatgagtccaaagggaca
gctagcctaccaaaggtggttgtctatcctgtcaatgtttcccctcagcgggcggacagt
ccaagagtcacagactccagccctgagcaggctactgcccagcggcaaaaggacttccaa
acggcacatctgagatccagcatcaccgtcctgtcgtccttgaaagaggtggattgcaca
agccccttacatgatgcaggaagtgaggatgaggatcagcagtgcaggactccaccagga
ggcggacatggtcagcttcagaggcagcaagccacagacttttctcagcagcagcagggc
aagtgtctgcttagtccccgcagtttaggcagcacagactctggttacttctcacgttct
gaaagtgcagaccaggccatgagtcccccgagtccctttgtcaaaataaccccaccaaca
gacatggatgtcaccaaaaatgtacttcctaatctccctgcagtggttgccactgccatg
catgtggcttctgtggagaagccacgtgttgtgcaaggacaaatgcgtcctccgttagaa
acaaaagcactctctctcgaggaacgaatctcaaagttaatatcggacaatgaggcagtg
gttgacgacaaacaactggacagtgtcaaaccaagaaggacttctctttctaggagaggt
agcatagactcccccaagtcatatatatttaaagactcttttcaatttgaccttaaacca
atggcgagaaggtcgagttccagctcagacatacccaagtcccccttcacccccacagaa
aaatctaagccagtatttcttctatctgtacccaatcagtatacaccaatggactgttta
ccaataacaagaagtaattctatgcccacaactccagggcactcgggtctcccacctaac
attgtccagcaaccccacccactacggatctgtcagtcttttgatgacaaaatgagttcc
ttaaacgatgatgtgttttcatctgccccctctaccccaaatccagcaatacattctcgt
actcttgtacgacaagtagcagtggaggatttctccacaagtgagggccttacctcagtc
cgttccatggacgaaggttaccatgggtctagcatctccactgagttaatgcaaagaagc
aggtcttttgagcatgcacaagaccgaaaccgaaagcctctgcagagcaaaggcacaatg
tatgaatgtgagacctgtcgcaataggtaccgaaaactagaaaactttgaaaatcacaag
aaattctattgttcagagctccatggtccgaaaaacaagccagtatctgtcagagagact
gagcaggatgtttttcaacatgtcatgcggcagccgttagtccccagaacagttatttca
ggaataatggaccaacagcaatcatttagaaaaagaaggaaaatgaagagtgttggtgac
gatgatgaccaatcaccaactgacaccaatcccccatgctctgtcagttttgattcttgc
caactatcaacagccagttcaggtcagccattttctcagcactctatcatggttgatcta
cagcctaaaagcaacccaccgcaaataactcaaaatcagctagtagcaagaggtacagat
gcatcagaatcaagactgtcaccgatcagagaaacccaggttaacacctctggtaaagag
agaggcgacctacagaggcaaggcagcggtacatcagttatcagacacaccaactcttta
agcaagcccaattcctttgagacctctgaatctattgacagggcctctcctgttgatttc
atgtacaaagatggccatagcacaggaaaaactaagaccgatgctactgccaatctttca
ttagagagctaccatgaaaagatgtccattcctaaatgtgccgaccaggggaaacaaggg
atggaaaaccgtgtcgacagcactttagcagcagtggctgagagctgtgctgctgtccag
cagtctcgtctggttcgccaaaataacattcctgaaatcctggtcacagaggaacccgat
cgggagcatgacggtcagagcactgagcaaggggaaaaggttgcagatacattcaactgg
ccccagaggagcgagagcctgtccaaactaccgacagaaaagcttccacccaagaaaaag
agaattcgtctggctcagatggaacactcctctggagaatcaagctttgagtcctcactg
tctcgtagcctcagcagagacagtagcctctcaagatgctccagtatctcagcctccttc
gaccgggatgagccatccaggtcagaaagcccctccagaggagaatttgtgaacaaaata
tctgagcatcaagggctaccaatagccttcaacaccctgggggtccctggcatgataaga
cgtgctgcctcagaacagatcagttgcactcaaccctcagtggagatcttgtgcgactat
cgcagcaagtcctttgactttggcagtgtctcccccagcaggtctctgccacccaacagg
tcaatgtcaccaatggaactgccaacgagtgttcaagccttcccatctgtacaggtacct
ctcattgaaaggcgaagggggcccttggtacgccagatgtctttaaagattgggccagag
agtcagcaacatgtcgggaggcatgccatacctctccagaggctccccactgtattctct
acatctcagcagaggcctcaacagactaccaacaagcctccccttgcccaaccctttatt
gtgcattgtggagaaactctccctcagaagaatgaaagaatggtgcaaagcattaacttg
ggcagccacggtcaactgcctcaaattcatggccttccacccccttggcacctaacgtcg
agggttcagacatgccaaaatatacagcaatctgtggttcatgttgtggtcggccaagaa
gatgcccagaacaactctgctgactctcaagacaaaagctttgtgcccaaatatcaactg
cagtgtcctgctctgagaccaagccaaacatactctctctctaccacacagggtactcag
acaactttgccagtcttaacaatacctattgccaatcagatgcaaagtattttgaagtct
tcagatgttctccacaatgtctgtgtggcacaaccgtgttttcagattgtaagcaataag
acacaatcaatagtcttgcctgtaagcctacaaaatgacccaccttctcaaaacctacca
ggtgctctccaattgccacagatactgataactcatgagcagatgcacccttccctctct
gtgaccagtaacctgtatgttgtagatactgacacaaagactgtaccagaaatgaacaag
gacaggactccagcatctactagccttcaagtaaaacacagtttagtttccaatacccag
aaccatattggagaaattcaaagagctccctccctggggtccttacactgcacacagaaa
atggcagctgtgaccctttgcccacaacaagagcccattgcctcaagcaagagaatgctc
tcccctgccaacagcttggatatcgccatggaaaaacatcagaagcgagcaaaggatgaa
catggtgctgcatgcctcactgatggcaggtcagtcaactacctgaactccaagatggcg
gaggtaactaggcaacggaagctgatgctagtccggcaggtgtgcaccactgaaccggtg
gacagtcccattgaaactgaggcccctccactgcaacacgagaagccagtaggtgaaaag
gacgcccagactcctaagaactgcaagactataacacctgattgcaccggaaaggatgaa
ccatcttctgtagttccccaggaacaaccacgctctgcattaaacaccactccagggagt
catgtctcctcctctgtgctagctaacgcctccctgaagcctcaagacaagagcgaggaa
gagagatggtctcccgccaagtctcccattaggccctcgactttccatggacaggtgaaa
ttggcctcatctgtatctgtcgtcaacacacgagacagccatcgcctgtctttccccagc
ctgaaaactgccaccacctttacttggtgttacctgatgaagaggaggcctctgcatgtt
ccccagacggaccagaaggtctcggcctactccacctgggcggtgagccccaacaacccc
aacccactgggcctgcccaccaaagtggtgatgtctctctttgactccaagcagaactcg
aaaaaaatacactacacagaggccataacgacaagtatgaaatccgacatcttggcctat
tcaagcaagctgaaagacgtcatgcctaaggtcctaaagcctcagaaaactgagaataac
agcaaagtgcaacctgagagtcaggtgagcagcgagtcagacaaggattcttcctcatcc
aaaatagagccacggagggtcaaaatatttgatggaggattcaaatctaacgaggactat
gtctatgttcgtgggcgtggtcgtggtaaatacatctgtgaggagtgtgggatccgctgc
aagaagcccagcatgctgcgtaaacacatccgcacccactctgacgtacggccctaccac
tgcacccactgcaacttctccttcaagactaaagggaatctgaccaagcatatgaagtcc
aaggctcacagtaagaagtgcatggagatgggggtgtctgcaggcctcgaggaccatgat
acagaggactcaggagaccgtagccaggttggcagtacagaccgcccagattcagacgga
gaggactcggagggcgctgacgatgacaacgatgatgacaacgaagaagaggaagaggac
agccaggctgagtcgggcctgtccaccaacccctcggtctcggccagcccccagcacata
ccctcctccctccaggctgagctccctcccagctccctcctggctcagatgtccatccac
caccaccacccagctcccttgtccctcccccagctccccacatccgactcccacacccac
cacacccacgacgcctcagacacagagtccgtgcccatgctgagccccgtctccctggtc
aagcagatgtcaatctccggtgggtgctcaagccctggccccctaccctactccccaccc
ccccacacctccgacactgagtcggtgcacatgatgagccctgtctcgccgtgcaggcag
atgtccatcgactaccccgatgttgacgtgccccctagtccccccgtaccaggcaagggc
tgctccaagctcggccaggatggctctttggctgctcccaccctaccaacgagtgagcca
ggtgtccctttcgggacagacgtcagcactcagaccgcctctttcaccccccagacttcc
tcctacagcccctggcactttccctcccagggcccgacccaaggatcaggggccacacag
gggggacacacgcacctcttcagtcacctgcctctgcactcccagcagccctcttgctcc
tcctacagcatggtccccgtggggggcatccagctggtgccagctggcctgccagcctac
tccacctttgtgcccatccaggctggcactgtccagctcaccatccctgcagtgagtgtc
atccaccggaataccagtcctctcccgttccccaaatcctctaactccccccagcctgag
ggctctgtcttgacccccaccaaccagcccctggtggttcaggagcccatcagcagtatc
atgccctgcttccccctggggcaggtcactggacttcaggcccttggggcctcccagcag
atgctgcagtccatgggtctggagaccctcaacgtcatgggactgaccagctcaggagcc
ctgacctccactcagctgctgtcccagcacggcctgacgctcaacgcaaccctgggcctg
caggccctgactgccagccccagctcccagagcagcacgggaccccaccatcaccacacc
caccacacacccatccccggcctgcagatcctcaacattgccctgcccgcactcatcccc
tcgctcagccctctctccgccctcagtcccctccctggaccctctgagaggcagggcagc
cctgaggcccaaggggccaccccactctcctctcagactgaactaggacccttggtcagc
tgtccatctgttgcatcatcccttcccactgccaccatgagaggaagtcccgcccaggaa
atgacatcatcgggcagcagacccagcagctctgggcacaggagctccggaggctctgat
cacacgcagactcccgggaaggaagggagggttacaacatctctaccacaaccctccccg
gctccagctgctgagggggttgttgagcgggcagggggagccagtgagcctgtcatgcct
cgcaggcagtcgatgctgtcacggcagcaggtgacggaagactttatcgatgactcagca
tcaagcgatgacgaggaccgactggtcatcgccacctga
DBGET
integrated database retrieval system
