Oncorhynchus tshawytscha (Chinook salmon): 112229609
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Entry
112229609 CDS
T05605
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00512
Mucin type O-glycan biosynthesis
otw00514
Other types of O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
112229609
00514 Other types of O-glycan biosynthesis
112229609
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112229609
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
112229609
Glycosyltransferases [BR:
otw01003
]
Glycan extension
Type 3 chain
112229609
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_transf_25
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
112229609
NCBI-ProteinID:
XP_024251312
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All DBs
Position
LG31:17462458..17473630
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AA seq
336 aa
AA seq
DB search
MITLSLVPFVSGLCIGFLSIQYFVYSDTSTAKPAVFSLGNSSGVHNDKRVPRHIHSDEDR
NVAANLSQNVRLLCWIMTGPKNLESRTKHIRATWGKRCNKVLYMSSVETEFPTVGLNVTE
GRDQLYWKTIRAFQYIYQHHRNDYDWVLKADDDTFVVIENLRHTLSKQDPEKPVYFGRRF
RPFVQQGYMSGGAGYVLSKEAVRRFIKGFDTGKCSHFSTIEDMALGKCMETMGVEPGDSR
DVKGRQTFHPYPPHMYLVKEPPRKLPWYLLYDHYKPREGPECCSDHIVSFHYIYPVEMYT
LEYFTYHLRPYGYKYRYNPDAVAAEIESNTTTPVSA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatcactctttcactggtaccctttgtgtctgggctgtgtataggatttctgtctatt
caatactttgtttactcagacaccagcactgcaaaaccagctgttttctcactgggtaac
tccagtggagttcataatgacaaaagggttccaagacacatacactcagatgaggacagg
aatgttgcagccaacctgtcccaaaatgtacgactactatgttggatcatgactgggcct
aagaacctggagtccagaaccaaacacatccgggccacctggggaaaacgatgcaacaaa
gtcctctacatgagctcagtggagacagaattccccacggtggggctcaacgtaactgag
ggacgagaccagctctactggaagaccatcagagccttccagtacatctaccaacaccac
cgcaacgactacgactgggtcctcaaagccgacgatgacacgttcgtggtcatcgagaac
ctccgacacacattgtctaaacaggacccggagaagcctgtatactttgggagaaggttc
cgcccgttcgtccagcagggttacatgagtggtggagccggctatgtcctcagtaaagaa
gccgtcagaaggttcatcaagggattcgacactgggaaatgttcccacttctccaccata
gaagacatggctctagggaagtgtatggagactatgggtgtggagcccggggactccaga
gatgtgaagggaaggcagacgtttcatccctacccaccacacatgtacctggtcaaagag
ccacccagaaaactgccctggtatctcttatacgaccactacaaaccaagagagggccca
gaatgttgttcagatcacatcgtatcatttcactacatctaccctgtagagatgtacacg
ctggaatacttcacctatcatctacggccctatggatacaagtacaggtacaaccctgat
gctgtagcagctgaaattgagagtaacaccaccacacctgtctctgcttaa
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