Oncorhynchus tshawytscha (Chinook salmon): 112229624
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Entry
112229624 CDS
T05605
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112229624
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112229624
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112229624
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1D. Rev-Erb
112229624
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112229624
NCBI-ProteinID:
XP_024251329
UniProt:
A0A8C8JMJ4
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Position
LG31:16578626..16592201
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AA seq
641 aa
AA seq
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MESTKAGGVIAYISSSSPESCHSDSNDCSYNSSHSCHQDNVVNKPLNMAGLTLPLAHTIA
KTGSTASTAKCDITKINSLVLLCKVCGDIASGFHYGVHACEGCKGFFRRSIQQNIQQNIQ
YKKCLKNESCAIMRINRNRCQQCRFKKCLLVGMSKDSVRFGRIPKREKQRMLLEMQSAVN
NMMNNSQLHSQFHCNTPFPLANPLQSPACPVEPRPQYVDSGLGSVPSSSTSPAASPRSNQ
SEETSSDREPAVTKNKSPSPNSVSPSSASDCGSEEVIGSVTRAHQETLIYNQEQGSPSPQ
SQAYAQLTSPGAEQHVSDTGKRIDERNRNQQEDGNQQIKNQNHQNDLASFTAAQAHYQAQ
ERPTNTGPQGTDSHHRQEDYTTSLSENYCPYSRDRLPTCSPSGHCPSYDQHGLRGGNNST
SQATSNSHGGFSGLLWNRGNRMHLLCPMNTSPHVNPHNSGHGIWEEFSHSFTPAVREVVE
FAKRIPGFRDLSQHDQVSLLKAGTFEVLVVRFASLFDVKDRIVTFLGGNKYSVETLQAMG
AGDFLTSMMDFSDKLMGLGLSEEEMSLFTAVVLISADRSGIENINSVEALQETLIRHLRG
LITKNHPNESAIFTKLLLRLPDLRSLNNMHSEQLLAFKVHP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaatctacaaaagcagggggtgtaatagcctacatcagctcctctagccctgagtca
tgtcatagtgactcaaatgactgcagctataactcctcccacagctgtcaccaggacaac
gtggtgaacaagcccctaaacatggcaggcctcaccctcccgctggcccacactatcgca
aagaccggaagcacggcctccactgcaaaatgcgacattactaaaatcaacagcctggtg
ctgctgtgtaaggtgtgcggagacattgcatctggattccactatggggttcatgcctgt
gagggctgcaagggtttcttccgtcggagcatccagcagaacatccagcagaacatccag
tataagaaatgcctgaagaacgagagctgtgccatcatgaggatcaacaggaaccgctgc
cagcagtgtcgcttcaagaagtgtctgcttgtcggcatgtccaaggactctgtgcgtttc
ggccgcatcccaaagcgtgagaagcagcgcatgctgctagagatgcagagtgccgtgaac
aacatgatgaacaacagccagctacacagccagttccactgcaacacacccttccccctg
gccaatccgcttcagtcgccagcctgccccgtggagccccgcccccaatatgttgattct
ggcctaggctccgtcccctcctcctccacctctcccgccgcttcccccaggtccaaccaa
tctgaggagaccagctctgaccgcgagcctgcggtcaccaagaataaaagccccagccct
aactctgtgtctccatcgagtgcttcagactgcgggtcagaggaggtgattggctcggtg
acccgggcccaccaggagaccttaatttacaaccaggagcaaggtagcccctccccccag
tcccaggcctacgcccagctgacctccccgggggcggagcaacatgtcagtgacactgga
aagaggatagacgagaggaaccggaaccaacaggaggacgggaaccagcagattaagaac
cagaaccaccaaaatgacctggcctcattcacagccgctcaggcccattaccaggctcag
gagaggcccaccaacactgggcctcagggtactgacagccaccatcgccaggaggactac
accaccagccttagcgagaactactgcccctacagcagggacagactgcccacctgctcc
cctagtggccactgcccatcctacgaccaacatggcctgagaggaggcaacaacagcact
agccaggccacctccaattcccatggaggattcagtggactactgtggaacaggggcaac
aggatgcatctgctgtgtcccatgaacacgtctccccatgtgaacccccataattcaggc
catgggatctgggaggagttcagccacagtttcaccccagctgtcagggaggtggtggaa
tttgccaagcggatcccaggcttcagagacctctcccaacatgaccaggtcagcctgctc
aaggctggtacctttgaggtgctagtggttcgctttgcgtccctgtttgacgtgaaagac
cgcatagtgacgtttctgggtggtaacaagtacagcgtggagacgttacaagccatgggc
gccggcgacttcctgacctccatgatggacttcagcgacaagctgatggggctcggcctc
agcgaggaggaaatgagcctgttcaccgctgtcgtcctcatctctgccgatcgctcaggg
attgagaacataaactctgtggaggctcttcaggagactctgatccggcacctgaggggc
ctcatcactaagaaccaccctaacgagtcggccatattcaccaagctgctcctcagactg
cccgacctccgctccctcaataacatgcactctgagcagctgctggccttcaaggtccat
ccctag
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