Oncorhynchus tshawytscha (Chinook salmon): 112229644
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Entry
112229644 CDS
T05605
Name
(RefSeq) transcription factor HIVEP3-like
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112229644
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112229644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_16
zf-H2C2_5
zf-met
Motif
Other DBs
NCBI-GeneID:
112229644
NCBI-ProteinID:
XP_024251354
LinkDB
All DBs
Position
LG31:complement(15427719..15469943)
Genome browser
AA seq
2000 aa
AA seq
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MEALHSHSCLPTGEQSGVHDQPQPGESALPLPDPQPPKSPSSQNHEPQTQQTRSKQGGPQ
QQQQQQQQHHGQHHKLPNKRERKRLRHQRQSVDSDTPPAEDGKHAKAEATPTRVARTSSG
GTRATPSSSSTSTQSTEAPDTEENQEGTLKQKRERKPGKPGKYVCSYCGRACAKPSVLQK
HIRSHTGERPYPCAPCGFSFKTKSNLYKHRKSHTHRVKAGLASGEPSALEEPVPESEDET
REPLSAASSNMERQGSVANEKTHEDTERSTEQSSGMDNSYAVKKRLAMRLSRGKRGPLGS
SDSISSSMGMGSRGSTESGYFSRSESTEQSQDSPPNVTKSAKSYAEIILGKYGRLGHLQR
MSRHQDQQPSGSQGQQEKSIPFTVPKKQVIDHITNLITINEAVVDTSKIDSVKPRRFSLS
RRSSTESKVSLSLKESPVVHHSTNNPGDPGFKSSGSITMGVPCEKFHHHQSLHVDSTAGQ
TSTSMAPLLRSLSMPSAASSTDASSGACPRNFRLSQSFDERSETQSRHIGMLRRQPAIEL
GAEFNKEEHSLHSSSNTLYNHNMSIVPPDHKQCQPEPYECETCGVGCKNWEGYKAHKRSL
CIARLPQESLGTTICQLDRSQLIHYPINRPGVLAMRKRRKEESFESDDPSSPVSIPTLST
LVQGRDERSVACNRNSWSRLEQDWGGTSKGFSVIQHTSSFEKQDTLFTESQGKEEAHIQF
PSHEDASQKQLQEHSSKPTPRKLVRQRNVQVPEIFITEDSNTNVIESVQTQSEMASIMPK
QTKRTEEFQWPQRSLTLSGVPIEKLPPKKKRIRLAEAAQSSGESMSSFDSISLPRSPSQD
SCASHASSRSASFEESTRPGDMETLAGIPLRRSRAPNMLTVPGLHHHKREMRRSASEQAP
HDPQQQSVLMAMSEMRSKSFDYSSLSPERSAAGWRDRRKCLLMRHTPVRDPEEEEQPAKP
AELKQNPSSCIIAKHTALKVNNPSHCSPSPDPVSPNTLSRQSPGPQHLSSAAGSPLSGVT
SCNPVQTLCGEPPSQWKLDQSIQLTGHCFEVLPSQKSVESPDPLQRVAPSPLCSGKPVII
SLRPVHTYIHPAQTRPVYPPHPLPTPCPLGIARAHYLPISTGLKLEIPVPTHRHDGHSEF
VTHPPQILHPHPNITLSPELLRPSISPAVAVVRLQADTNTLASAIYTTLSQTTTYRSQEP
VCSALNSGNRNTLTSEHNSHLVKTLPVSIKRLSETLLPVSQLTLPPGNHLALPLPPGSQL
WSEEGCRSSGSGSYKRMLSPSNSVDFSPESKQQQKRVKEEEEESCVGNVIAETSSKEEKV
EIPTCLPRVCTPISPEGPSYPTLQSTTSHSWCYLNYVKPNPSTSTDQPSVYSSWSTSEYD
SNPPGLSTKTALSLLDCKQRVSYTIYTMSPMSSTPAETTPEPADMKTPCPSEVHATLPGD
SHRVETTEQEQSAEDKEPKKEREEEEEKEEKEKEEEAQSTSKCREPPPRIWICEGGYRSS
EEYVYVRGRGRGRYVCEECGIRCKKPSMLHKHIRLHTDSRPYVCKHCNFAFKTKGNLTKH
MKSKAHGKKCHDGPMTGSSLEEAEEGGSEDCLVWPETGQGEHQHSDVSETEEDDDDNEYD
DEDDDGEEESWSHEDPSSTSHLKPPKPPNQNRTTPDRDRTRPSGSSQPSQPQRLNPQEPS
LCYLAGSPSKKRALFSRRRHLDCAGHRSPRHCPSPTLSPSPSHRLSSSPAPALSPSPSPS
HRLSSSPAPALSPSPSSPVLISSPSPISISISSPVLISSPSPISISISLPVLISSPSCHV
SPSLERHPSSLRGLSPIRPKSPSSGSSAPQMQSYSVQEDDELRPPLLSPRTRPSRGGQGG
VLSHLPLHSQQLARTANLLIPIGGIHMVQPRTSPLYSLVTSPVAAKDTPTPARMDQSMTA
QNTPTPSEMDRSRIRRAGLDEVPLSWPSSLKDHQNSLKEAARPSTSMHTSYQGNRVGEGE
AGAKCRQSTPLPDKAVLVPH
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgttgcacagccatagctgcttgccgactggggagcagtccggagttcacgac
cagcctcagccaggagagtctgctctgcctctcccagaccctcagcctcccaaatctccc
tcctcccaaaaccatgaaccgcagacacaacagactcgctccaaacaaggaggccctcaa
caacaacaacaacaacaacagcaacaccatggacaacaccacaaactgcctaataagcgg
gagcgcaagcgtctcagacatcagaggcaaagcgttgattccgacacccctccagcagag
gatggtaagcatgcaaaggcagaggcaacaccaaccagagtggctcggacctcgtctggc
gggaccagggcgactccctcctcatcatccacatccacccagtctacagaggctcctgac
acagaggagaaccaggagggcaccctaaagcagaaacgggagcgtaagcctggaaaacct
gggaaatatgtgtgctcttactgtggccgtgcctgtgccaagcccagcgtcctgcagaaa
cacatccgctcccacaccggagagaggccctacccttgtgctccctgcggattttctttc
aagaccaagagcaacctctacaagcaccggaagtcccatacccacagggtgaaggccggc
ctcgcctctggagagcccagtgctttagaagaaccggttccagagtcagaagacgaaact
agagagccgttgtctgctgcttcttccaacatggagagacaaggcagtgtagccaatgag
aagacccatgaagacactgagaggtctacagagcagtccagcgggatggacaactcctac
gccgtcaagaagaggctggccatgcgcttgagccgagggaaacgtggccctctaggctcg
tctgactcgatcagttcctcgatgggtatggggagtagaggcagcacagagtctggctat
ttctctcgttctgagagcactgagcagtcacaggacagcccacccaacgtaaccaaaagt
gccaaaagctatgcagagatcatcctggggaaatatggccgtctgggccacctccagagg
atgtcccggcatcaggaccagcagccttctggaagccagggacagcaggagaagagcatc
ccattcacagtgcccaagaagcaggtcattgaccacattaccaacctcatcaccatcaat
gaggctgttgtggacacaagtaagatcgacagcgtcaagcccaggaggttctctctgtct
aggagaagtagcacagagtctaaggtttctttatctctgaaagagtcgcctgtagtccac
cacagcaccaacaaccctggagacccaggctttaagagcagtggttccatcactatgggt
gttccgtgtgagaagtttcatcatcaccagtcactacacgtggattcaacggcaggccag
acatccacttccatggctcctcttctgagaagcctctctatgccctctgctgctagttct
actgatgcctcctctggcgcctgtccacgaaacttccgccttagccaatcttttgatgaa
cggtctgaaacacagtctcgccacattgggatgctacgacgccagcctgctatcgaacta
ggtgctgaattcaataaagaggaacatagtttacacagtagctccaacacgctctataat
cacaatatgtccatcgtgcctcctgaccataaacaatgtcaaccagagccgtacgagtgt
gagacctgtggcgttggatgtaagaactgggaaggttataaggcacacaagagaagtctg
tgtatagcacgacttccccaagagagtcttggtacaacaatatgccagctggaccgttca
cagttgatacactatccgatcaacagaccaggggttttggcaatgcgcaagagaaggaaa
gaggagagttttgaatctgatgatccatcctctcctgtctccatacccaccttgtccacg
ttggtgcaaggcagagacgaaagaagcgtagcatgcaatagaaactcatggtcacgatta
gagcaggattggggagggacatcgaaaggtttctcagtgattcaacatactagttcattt
gagaaacaggacactttgtttacagagagtcaaggtaaagaggaggcacatattcaattc
ccatctcatgaggatgcatctcaaaaacaactgcaggaacactcgtccaaaccaacacct
cgcaaactggtgcgccaacgcaatgttcaggtccctgagatattcatcactgaggattcc
aacaccaatgttattgagtctgttcagacacagtcagaaatggcctccataatgcctaaa
cagaccaagaggacagaggagttccagtggccacagaggagcctcaccctgtctggggtc
cccatcgagaagctgcccccgaagaagaaacgaattcgtcttgccgaggccgcccagtct
tcaggggagtccatgtccagctttgactccatctccctgcctcgcagccccagccaggac
agttgcgcatcccacgcatctagccgctctgcatcctttgaggagtccaccagacccgga
gacatggagaccctggctgggataccattgaggaggtccagggcgcctaacatgttgacc
gtcccagggctgcatcatcacaaaagggagatgcggcggtcggcctcagagcaagcacct
cacgacccacagcagcagtctgtcctgatggcgatgtcggagatgcggagcaagtccttt
gactacagcagtttgtcccctgagcgctctgcggccggctggagagacagacgcaaatgt
ctcctcatgagacacactccggtcagggacccagaggaggaggagcagcctgccaaacct
gcagaactgaagcagaaccccagttcctgcattattgccaaacacacagcactaaaggtg
aacaacccttctcactgcagccccagtcctgaccctgtcagtcccaacaccttatctaga
caaagcccaggtcctcaacaccttagttcggccgctggttcccctctgtcaggcgttaca
tcctgtaaccctgtgcaaactctttgcggagagcctccctcacaatggaaactggatcaa
agtattcagttgactggacattgctttgaagttctaccctctcagaagtctgtagaatct
cctgatcccctccagagggtagccccatcacctctctgttcagggaagcctgtaattatc
tccctccgtcctgtccacacctacatccaccctgcccaaacccgccctgtctaccctccc
caccccctccccaccccgtgcccattagggattgctagggcccactaccttccaatatcc
acaggcctgaagctggagattccagtcccaactcaccgtcatgatggacattcagaattt
gtaacacatcctccgcagatcctccaccctcaccctaacatcacactcagcccagagtta
ctccggccctccatatcaccagcagtagcagtagtccggctacaggcagacaccaacacc
ctagccagtgccatatacaccactctgtcccaaaccacaacatataggtcccaggaacct
gtttgttctgcattaaacagtggcaatagaaataccctaacgtctgaacataacagccac
ctggtcaagactctgcctgtaagcattaagaggttgtctgagactctgctaccagtcagc
cagttgactctgcctccaggcaaccacttggctttgcctctgcccccaggcagccagttg
tggtctgaggagggctgtagatcttcaggctcaggaagctacaagcgcatgttatcccct
tcaaacagtgtcgattttagccctgagtctaaacagcagcagaaacgagtgaaggaggaa
gaagaggagagttgtgtaggaaacgtaatcgcagaaacatcatcaaaagaagaaaaggtt
gagattccaacatgtttaccgagggtgtgtactcccataagtccagaaggaccttcatat
ccaaccctccagtccaccacctctcacagctggtgttatctgaactacgtcaagccaaac
ccctccacctcgactgaccagccctcagtgtactcctcctggtctaccagcgagtatgac
tccaaccctccaggcctctccaccaagacagccctgtccctgttggactgcaagcagagg
gtcagctacaccatctataccatgtctcccatgtcatccaccccggcagagaccacacca
gagcctgccgacatgaagacgccatgcccttctgaggtacatgccactctgcccggcgac
agccaccgtgttgagacaacagagcaagagcagtccgcagaggacaaggagccaaagaaa
gaacgagaggaggaggaagagaaggaagagaaggaaaaagaagaggaagcccagtcaacc
agcaaatgtagagaacctccacctcgaatctggatctgtgagggaggctacaggtctagt
gaggagtacgtgtacgtgcggggtcgaggcagaggcagatatgtgtgtgaggagtgtggc
atccgctgtaagaagcctagtatgctgcataaacatatccgcctgcacactgactcacga
ccctacgtctgcaagcattgcaactttgccttcaaaaccaaagggaacctgactaaacac
atgaagtccaaggcccatgggaagaaatgccatgacgggccaatgactggctcttccctg
gaagaggctgaggaaggaggcagtgaagactgcttagtctggccagaaacaggacagggc
gagcaccaacactctgacgtcagcgaaactgaagaagacgacgatgacaacgagtatgat
gatgaagatgatgatggtgaagaggagtcctggtcccatgaagacccttcctccacaagc
cacctgaagccacccaaacccccaaaccagaacagaaccacaccagaccgggacaggacc
agaccatctgggtcaagccagcccagccagcctcagaggctgaatccccaggagccaagc
ctctgttaccttgctggttcccccagcaagaagagagctctgttctcccggaggaggcac
ctggactgcgctggtcaccgctccccacgccactgtccatcaccaaccctatctccatct
ccatctcatcgcctgtcctcatctccagccccagccctatctccatctccatctccatct
catcgcctgtcctcatctccagcgccagccctatctccatctccatcatcgcctgtcctc
atctccagccccagccctatctccatctccatctcatcgcctgtcctcatctccagcccc
agccctatctccatctccatctcattgcctgtcctcatctccagccccagttgtcatgtc
tccccctccttagagagacatccgtcctccctaagaggcctctcacctatcaggcccaag
tcccccagtagtggctcctctgcccctcagatgcagagctactctgttcaggaggatgac
gagctgcgtccccctctcctgtcccccaggactagaccatcccgagggggccaagggggt
gtcctcagccacctgcctctccactcccagcagctagccaggaccgccaacctgctgatc
cccattggggggatccacatggtacagcccaggaccagtccactctacagcttggtgact
agccctgtggcagcaaaggacactcctactccggcaaggatggaccagtccatgacagcc
cagaacacccctaccccttcagagatggaccggtccaggatcaggagagctggactggac
gaagtgccacttagttggccttcatcattgaaggaccatcagaacagtctgaaagaggct
gctaggcctagcactagcatgcacaccagttaccagggcaacagggtaggagagggagag
gccggggccaagtgcagacagtcaacacctctcccagacaaggcagtgttggtccctcac
tag
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integrated database retrieval system
