Oncorhynchus tshawytscha (Chinook salmon): 112229677
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Entry
112229677 CDS
T05605
Name
(RefSeq) partitioning defective 6 homolog gamma
KO
K06093
partitioning defective protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112229677
09144 Cellular community - eukaryotes
04530 Tight junction
112229677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112229677
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
112229677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
112229677
NCBI-ProteinID:
XP_024251401
UniProt:
A0AAZ3PKX3
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Position
LG31:13356071..13392790
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AA seq
441 aa
AA seq
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MNRSFIKSQSSLQYLDCIAVEVKSKYGAEFRRFSVDRFKPGKFEDFYKLIMHVHRISNME
VMIGYADIHGDLLPINNDDNFCKAVSTAHPLLRVFIQRQEEVDYSSYGTHSLTRKKKAVV
ALRNDVNRKRPHIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
VRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVTGKTLDQVTDMMIAN
SHNLIVTVKPLNQRNNVVRASRISGSSGQSSDSSGSTGYPSLSTTAMVTGAHGYADELES
DEESDIVIESSLKRPSRRSNTSVVSVASTSRSHTQAPPPAPVEHPSPPTRPLSVVSTASF
HSQPSLNGLSHQLHRDLNLQHSQYQPHTLQHHHSQHHSSNPALRESNGSLHKILSTMRTD
PRHSLALPRGGVEEDGTVITL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagtttcattaaatcccaatcttccctgcaatacttggactgcatcgcggtt
gaagtgaaaagcaagtatggagcagagttccggcggttctccgtggaccgtttcaaaccg
gggaagttcgaggacttctataagctcatcatgcatgttcaccgcatctccaacatggag
gtcatgattggctacgctgacatccacggagacctgctgccaatcaacaatgacgacaac
ttctgcaaggcggtgtctacggcccacccactgctccgggtcttcatacagagacaagag
gaggtcgactacagcagctatgggacccactctctgacccggaagaagaaggctgtggtg
gcgctgaggaacgacgtcaacaggaagcgacctcacatccgcatcggaatgccgcaggac
ttccggccagtctcctccatcatcgatgtggacatcttgccggagtcccaccgccgcgtt
cgtctctaccgtcacggctccgacaaacccctggggttctacatccgggacgggaccagc
gtacgggtgacgccccatggcctggagaaggttcctgggatcttcatctcccgcatggtg
cctggcggcctggctgagagcacaggcctgctagctgttaacgacgaggtcctggaggtc
aacggcatcgaggttactgggaagacactggaccaggtgactgacatgatgattgccaac
agccacaacctgattgtcacagtgaagccgttgaaccagcggaacaacgtggtgcgagcc
agccggatctccggcagctccggtcagtcatcagacagcagcggttccactggctacccc
agcctgtccaccacagccatggtgaccggtgcccatggctatgccgacgagctggagagc
gacgaggagtcagacatcgtcatcgagagcagcctgaagcggccgtcgcggcgctccaac
acatcagtggtgtctgtggcatcaacatcacgctcccacacccaagcccctcccccggca
cccgtggaacaccccagcccccctacccgacctctctctgtggtttccaccgcctccttc
cactcccagcccagcctcaatggcctctcccaccagctgcacagggacctgaacctccag
cactcccagtaccagccccacaccctccagcaccaccattcccagcaccacagcagcaac
ccagccctccgggagagcaacggcagcctgcacaaaatcctcagcaccatgaggacggac
cctcgacacagcctggccctgccccggggaggggtggaagaggacggcaccgtcatcacc
ctataa
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