Oncorhynchus tshawytscha (Chinook salmon): 112229679
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Entry
112229679 CDS
T05605
Name
(RefSeq) protein Jumonji-like
KO
K11478
protein Jumonji
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112229679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112229679
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
112229679
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
112229679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
112229679
NCBI-ProteinID:
XP_024251403
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All DBs
Position
LG31:complement(13119675..13216582)
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AA seq
1293 aa
AA seq
DB search
MSKERPKRNIIQKKYDDIDGIPWSEERDVRKVLYLSLKEFKTAQKRQLGDGTKYTNGSHA
RGQLNGLGQKGHKADGLRFQSTDGSSEYSEDGPAKKRPRLQAQRKFAQSQPNSPSTTPVK
VSDTALPAPSAHIRDISRRKPKTEDFLTFLCLRGYSSWPNEGLSALPSNMAYFGSSQDED
ELDDDEEEYEDVKPDISVASTSCQSTPRKGKPPGKHAVNGHVLNGHSKSPRDSHKPRGKE
WVQVRERSERAEARREQALSQPEATARGHTTNGLPHRRAAEEPRKQVFKVNGVTRLSQPG
VHTAGAQKTKDFRLPSKTVKGQVTYTKAKRELVKKTKLNHRKHNTAASHRANSNNHHRHQ
RLPLSNSGKAQNSKTKTRKQVLLSNGVYKVANGGGVRLNGHLCAKQEVGRQGREGLRNSK
RRLEVAVAAIGAVADSQGQLVILENNPNPKKTKQHQTSPLETRSKKACQDKTLVPNGHIV
METTPPPTLLAPPPPPTPPATPPANPEPERQRPKRASAGKLMFIRQAQQRGQVASNPNHN
RSTTSESPCHTSGHNPGHIPHKPAEPRPDREWEREKERERERERERAERSRVSWAALGEA
PVFCPTQRAFQDPLVYLDSVREGAEPCGLCRVVPPADWRPECKLNDEMRFVTQVQRIHKL
GRRWGPNVQRLACIKKHLKSQGITMEDPPLIGGCEVDLARFFQLINDMGGMQQVMDLKKW
SKLADLLRIPKSAQDRLAKLQESYLQYLLSYDSLSPEEHQRLEREVLQEKEGLERLRGPL
EGHTERNLALPRYEPKNGLAGSLVQRSNGQLCSRLKELDSQQLKVGRRRLFAQEKNNGDK
TQQEEEELDMEKGVLSDQHKCIYKGKSVSLTNFFRIARNTMTMCFNKEPGAAEVEQEYWR
IVEQRHCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGWNLTVLPNNSGSILRHLGAVPGV
TIPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEKVKLDKVVHTLLQANG
TPGLEMLEKNIMISPEVLCQEGIKVHRTVQQSGQFVVCFPGTFVSKVCCGYSVSETVHFA
TPQWMNLGYEASKDLKCRHIAKPFSMEKLLYQIATAESKRENGHLLTTISALLKDLRNIE
MRQRQELYEAGLLSSARYGTHDNNLVPGDGRKKPRKWLALESSERRCQTCQHLCYLSMVV
QENENVVFCLECALRYVENHKSCRGLKMMYRYDEEQINSLVKQVCGKALGKTTEKCNGAS
PFKPPPKRGPRKRATVEVSLSRLSSHLSPAAVS
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacctaagaggaatatcatccaaaagaaatacgatgatatagatggg
atcccctggtcagaggagagggatgtgaggaaggtgctctatctctccctgaaggagttc
aagactgctcagaaaaggcagcttggagatggaaccaaatacacaaatggttcccatgcc
cgcggccagctcaacggcttggggcagaagggccacaaggctgacgggttgcggttccag
agcaccgatggcagcagcgagtactctgaggatggtcctgccaagaagaggcccagactg
caagcgcagaggaagtttgcccagtctcagcccaactctcccagcaccacgccggtcaag
gtgtctgataccgccctgcccgccccctccgctcacatcagagacatctccagacggaaa
cccaagactgaggacttcctcaccttcctctgcctgagaggttactcctcctggccaaat
gaaggtttgtcagcgttgcccagtaacatggcgtactttgggagctctcaggatgaagat
gagctggatgacgatgaagaggaatacgaggatgtgaagccagacatcagcgtggcgtct
acttcctgtcagtccacgcccaggaagggcaaacccccagggaaacatgccgtcaacggc
cacgtgttgaatggccacagcaagtcgccccgggacagccacaagcccagagggaaggag
tgggtgcaggtgagggagcgcagtgagagggctgaggcccggagggagcaggccctcagc
cagccagaggccacagccaggggccacactaccaatggactgcctcacaggagggctgca
gaggagccccgcaagcaggtctttaaagtgaacggcgtcacacggctctcccagccaggc
gtgcacacggccggtgcccaaaaaacaaaagacttcagactgccgtccaaaactgtgaag
ggccaagtcacatacaccaaagcaaaacgagaactggtcaagaaaaccaaactgaaccac
cgcaaacacaacactgctgcttcccatagagccaatagcaacaatcaccaccgccaccag
cgactcccgctctccaactcaggaaaagcccagaatagcaaaacaaaaacacgcaaacag
gtgctattatccaatggggtgtacaaggtggctaacgggggcggtgtgcgcctcaacggt
cacctctgtgccaagcaggaggtgggcaggcaggggcgtgaggggctgaggaactccaag
cggaggctggaggtggcggtagcagccatcggggcggtggctgactcccagggtcagctg
gtcatcctggagaataaccccaaccctaagaagacaaaacagcaccagaccagccctctg
gaaacacgcagtaagaaagcatgtcaggacaagaccttggtccccaacggacacattgtc
atggaaaccacccctcccccgaccctgctagccccaccccctcccccgactcctcccgcc
acaccaccagccaatccagagccagagcgtcagcggcccaagcgggcgtcagccggcaag
ctgatgttcatcagacaagcacagcagcgggggcaggttgcctctaaccctaaccacaac
cgctcaactacctcagaatccccttgccacacttctggacacaaccctggacatatccct
cacaaaccagcagagccccggcctgacagggagtgggaaagggagaaggagagggagaga
gagagggagagggagagggcggagaggagcagggtgagctgggcggcgttgggtgaggcg
ccagtgttctgtcccacccagcgggcgttccaggaccccctggtgtacctggactctgtg
cgggagggggcggagccctgcggactgtgtcgggtggttcccccggctgactggcgccca
gagtgcaaactgaacgacgagatgcgctttgtgacccaggtgcagcgcatccacaagctg
ggccgtcgctggggccccaacgtacagaggctagcctgcatcaagaagcatctcaaatct
cagggcatcaccatggaagaccccccgctcattggtggctgtgaggttgacctggctcgg
ttcttccagctgattaatgacatgggcggcatgcagcaggtgatggacctgaagaagtgg
agtaaactggctgatctgctgcggatccccaagtcagcccaggatcgtctggccaagctg
caggagtcctacctccagtacctgctgtcgtatgactctctgtcccccgaggagcaccaa
cgcctggagagggaggttctgcaggagaaggagggcttggaacgcctcagggggcccctg
gagggccacacagagaggaacctggccctgccgcgctacgagcctaagaacgggctggcc
ggcagtctggtgcagcgcagcaacggtcaactgtgcagccggctgaaggagctggacagt
cagcagctgaaggtgggacgccggaggctgttcgctcaggaaaagaataatggggacaag
acacagcaggaggaagaggagttggatatggagaaaggtgttctcagtgaccagcataag
tgtatttacaaggggaaatctgtatctctcaccaacttctttaggatagccaggaacacc
atgaccatgtgctttaacaaagagcccggtgctgctgaggtcgagcaagaatactggagg
atagtggagcagaggcactgccatgtggcagtgcattatgggaaagtggacaccaacaca
cacggaagtggcttccctgtgggaaagtccgagccattttctaaacatggatggaacctc
actgtcctcccaaataattctggatccattctgcggcatcttggagccgtgcccggggtg
accattccctggctgaacattggcatggtcttttctacctcatgctggtctcgagaccaa
aaccgccttccatacattgattacttacacactggtgctgactgcatttggtattctgtt
cctgctgaagagaaggtgaagcttgacaaggtggttcacacactgctgcaggccaacggg
acccctgggctggagatgctggagaagaacatcatgatctctccggaggtgctttgtcaa
gagggtatcaaggtccaccgcaccgtccagcagagtggtcagtttgtggtctgtttccct
gggacctttgtgtccaaggtctgctgtggctacagtgtgtccgaaaccgttcactttgcc
accccccagtggatgaacctgggatacgaggcttctaaggaccttaaatgccggcacata
gccaaacccttctccatggagaagttactctaccagatcgccacggccgaatcgaaacgc
gagaacggacaccttctgacaacaatctccgctcttctcaaagacctcaggaacatagag
atgagacaacggcaggagctgtacgaggcggggcttctgtcttccgcccgctacggaaca
cacgacaacaacctggtgcccggcgacggacgcaagaaacccaggaagtggctggcgcta
gaatcctcagagagacgctgccagacctgtcaacacctctgctacctgtccatggtggtc
caggagaatgagaacgtggtcttctgtctggagtgtgctctgagatacgtggagaatcac
aagtcctgcagaggcctcaagatgatgtatcgttatgatgaggagcagatcaacagcttg
gtgaagcaggtgtgcggcaaggccctggggaagacgactgagaaatgtaatggtgcgagc
ccctttaaaccaccacccaaacgcggtccccggaagagagccaccgtggaagtgtccctg
tcccgcctctcctcccacctgtctcccgcagccgtctcctaa
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