Oncorhynchus tshawytscha (Chinook salmon): 112229686
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Entry
112229686 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 2 isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112229686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229686
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112229686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
SOS1_NGEF_PH
Prok-RING_1
Pinin_SDK_N
PHDvar_NSD
PHD
Motif
Other DBs
NCBI-GeneID:
112229686
NCBI-ProteinID:
XP_024251411
UniProt:
A0AAZ3QYW8
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All DBs
Position
LG31:12601644..12669244
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AA seq
1184 aa
AA seq
DB search
MSIEEIRCNHLLIQMPTTPSSYAHPPACLPSSSSIPPTPPNFPFPSPPCSPGPGVKGVGR
AGGVTLRSPATRHLTHLDPWRRHSWEPGAIVTVQQKGMEPSDNRSVSLENLDPEEMEKVL
GVALDVRRGGRDPRRNPITQEGSLSSLTEEEAGSDVQHYSILEEQSNQLQGCSASAPTLS
VARHRNLQSTAPRPRSDCYETLPYRQLGGSTQSVDSDLGLLLWGREGSWTEVERDEAREE
RTGSPLERTFSFLRKMAGNRKNKEKERMREREKEARDREARYSNGHLFTSLTVSGTTLCS
ACNKSITAKEALSCPTCSVTIHNRCRDTLPNCAKMKQRQQKMALMRNNSALQNVTLRTKT
PMMRERPSSAIYHSDNLRQSLLGSRRGRSGLSLSKSVSTNNITGNLNDDSPLGLRRILSQ
STDSLNFRNRAMSMESLNDEGEEYYTSMLEEMEIEGRDFEADSWSMAVDSGYLQTHRKDI
IKRQDVIYELIQTELHHVRTLRIMERVFRQGMLEEVQLEPGVVHAIFPCLDRLTAIHARF
LAQLLTRRNHSLQPGSTYNFTIHQLGDVLLEQFSGQCADEMRKTYAEFCSRHLKAVKLYK
ELLARDKRFQYFIRRVCRGHLLRRHGVQECILLVTQRITKYPVLIQRILDNTKDNEEEAS
CLAQSLTQIRELLTSVDQQVMELERTQRLQEIRARLDPRAEAKVRDGGLFRGGELLRRRL
IHEGMLLWKTPGSRLKDVQVLLMTDILVFLQEKDQRFIFPCLDKSPVLSLQNLMIREIAN
QERGLFLISDSSPPEMYEVHAASKDDKNTWIRLIQHTVRSCPSREEFPLIETEDKALLRR
LKADIQQKDREVLELLQERVTLFSDLAEVTGGQEIMLPGGPNSRNLFRADMPQVPLGERL
LTDAIAEVDRLSELLLGSTFAVPLPCSFNGHPNHTGALVINGQEVVLNGMHGCPAAKDWN
GNQAGDRPSTEEVYQRLVNLSAHLHALQGTVIKQDSILELCLRSDGPPVDAPTTPTGRVW
RSLSRDAGMAEASTGAAIGELALLQRQHSLLQEELGRLRGADGRLRDSEKARAQLERQVR
DMKVHSTTVFDSVGPAGSEQAPPLRKASETNADTKLASQESIEHSEGHQEGSDVEVEVTS
DEEEEEEKEAKASPRSESPRDLQDIPEESEATAELPREPDVSHC
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgaagaaatccggtgcaaccatctcctcatccagatgccgaccaccccttcc
tcgtacgcccacccaccagcttgcctgccctcttcctcctccataccacccacccccccc
aatttcccgttcccctccccgccatgctccccaggccctggggtgaagggggttggcagg
gccgggggggttaccctgcgctctccggccacccgtcacctcacccacctggacccctgg
aggagacacagttgggagcccggagctatcgttacggtgcagcagaaggggatggaaccc
agcgacaaccgcagtgtgagtctggagaacctggaccccgaggagatggagaaggttctg
ggtgtggcgctggatgtccggcgaggggggagggatcctcggaggaaccccattacccag
gagggctccctgtcctccctcacagaggaagaggccgggtctgacgtgcagcactactcc
atattggaggagcagtcaaaccagctgcagggttgcagtgcatcggccccgaccctcagt
gtggcgcgtcacagaaaccttcaaagcacggccccccgaccacgctctgactgctacgag
actttaccctaccgtcaacttggaggatccacgcagagtgtggatagtgacctgggtctg
ctgctctgggggagagagggaagctggacggaggtagagagagacgaggcccgggaggag
aggacaggcagccctttagagcgcaccttcagtttcctacgcaagatggccggcaaccgc
aagaataaggagaaagagcgcatgagggagagggagaaagaggcacgggacagggaggcg
cgctacagcaatgggcacctcttcacctctctcaccgtgtcggggaccaccctctgttca
gcatgcaacaagagcatcactgccaaggaggccctcagctgccccacttgtagtgtcacc
atacacaaccgctgtcgtgacacgttgcccaactgtgccaaaatgaaacagaggcaacag
aagatggctctcatgaggaacaactcagctctgcagaacgtgacccttcgtaccaaaacc
cccatgatgagggaacgccccagctcagccatctaccactctgacaacctccgccaatcc
ctgctgggctcgcgccgtggacgctccggtctttccctctccaagagcgtctccaccaat
aacattacagggaacctgaatgatgactctcccttggggctgcgcaggatcctgtcccag
tccacagactcgctcaacttcaggaacagagccatgtccatggagtcgctcaacgatgag
ggggaagagtactacacctccatgctggaggaaatggagattgaggggcgggattttgag
gcggactcatggagcatggcggtggactcgggctacctgcagacgcatcgcaaagacatc
atcaagcggcaggacgtcatctatgagttgatccagacagagctgcaccatgtgcggacg
ctgcgcatcatggagagggtgttccgccagggcatgctggaggaggtgcagcttgagccg
ggcgtggtgcacgccatcttcccctgcctcgaccgtctcaccgccatacatgcccgcttc
ctggcacagctgctcacccggcgcaaccacagcctacagcctggcagcacctacaacttc
actatccatcagctgggagatgtgctactggaacagttctcgggccagtgtgctgacgag
atgaggaagacctacgctgagttctgcagccgccacctgaaggctgtcaagctgtacaag
gagctgctggccagagacaagcggttccagtacttcatacggcgggtgtgtcggggtcac
ctgttgcgtcgccatggcgtccaggagtgcatcctgttggtcactcagcgtatcaccaag
taccccgtactcatccagcgtatccttgacaacaccaaggacaatgaagaggaggcctcc
tgtctggcccagtctctgactcagatcagggagctactcacctcagtggaccagcaggtg
atggagcttgagcggacccagaggctgcaggagatccgggccaggctggaccctcgcgcc
gaggccaaggtgagggacggtggcctgttcagaggaggagagttgctccgcaggagactc
atccatgagggaatgctgctctggaaaacccctgggtccaggctcaaagatgtgcaggtc
ctgctgatgacagacatcctagtgttcctacaggagaaagaccagaggttcatcttccct
tgtctagacaagtctccggtcctctccctgcagaacctcatgattagggagatagccaat
caggagcgagggctcttcctcatcagtgactcctctcctccggagatgtatgaggtccat
gctgcctcgaaagatgacaagaacacctggatacgcctcatacaacacactgtcaggagt
tgtccttccagggaagagttcccactcatagagactgaagacaaggcccttctgagacga
ctgaaagcggacatccagcagaaggaccgggaggtgctggagctgctccaggagcgagtc
accctgttctcggacctggccgaggtgacagggggccaggagatcatgctgccagggggc
cccaactcccggaacctgttccgggctgatatgccccaggtgccgctcggcgagagactg
ctcacggacgccatcgcagaggtggataggctgagtgagctactgctaggctccaccttt
gcagtgcctctgccctgcagtttcaacggtcacccgaaccacacgggagcactagtgatc
aatggccaggaggtggttctcaatggaatgcatgggtgcccagcagcaaaggactggaat
gggaatcaggctggagataggccctcaaccgaggaagtgtatcagaggctggtcaacctt
agtgcccatcttcatgccctccagggcactgtgatcaagcaggactccatcctggagctc
tgcctgcgctctgatggcccgccagttgatgccccgaccacgcccaccggacgggtgtgg
cgctccctgtcacgtgacgcaggcatggccgaggcaagcacgggggcggccattggggag
ctggccttgctccagaggcagcacagcctcctgcaggaggagctgggtaggctgcggggg
gccgatggccgcctgagggatagcgaaaaagcccgagcccagctggagaggcaggtccgc
gacatgaaggtccacagtaccaccgtgtttgacagtgtgggacctgcaggctcagagcag
gctccaccccttcgtaaagcaagtgaaaccaacgcggacaccaaattggccagccaagag
tcaatcgagcattcggaggggcatcaggaaggcagtgatgtggaggtggaggtgacatca
gatgaggaggaggaggaggagaaggaagccaaagcgtcaccgcgctcggagagtccccga
gatcttcaggacattccagaggagagcgaagccacagcagaactaccacgagagcctgac
gtgtcacattgctaa
DBGET
integrated database retrieval system
