Oncorhynchus tshawytscha (Chinook salmon): 112229708
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Entry
112229708 CDS
T05605
Name
(RefSeq) frizzled-1 isoform X1
KO
K02432
frizzled 1/7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
otw04310
Wnt signaling pathway
otw04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112229708
04150 mTOR signaling pathway
112229708
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
112229708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112229708
G protein-coupled receptors [BR:
otw04030
]
Frizzled / Smoothened family
112229708
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
112229708
NCBI-ProteinID:
XP_024251463
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All DBs
Position
LG31:11893526..11897940
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AA seq
551 aa
AA seq
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MGNDKVCRMFSHLLVLIIFALLPQADGQYGERGMSVPEHGFCQPISIPLCTDIAYNETIM
PNLLGHTNQEDAGLEVHQFYPLVKVQCSPDLKFFLCSMYAPVCTVLEQALPPCRSLCERA
RQGCEALMNKFGFQWPDSLACESFPVHGAGELCVGQNVSDRSAPINPTSDVTESSHGQHR
TVKGQFRCPVALKVPPYLNYRFLGEEYCGAPCEPSKPHGMMYFNEDELKFAKIWIGIWSV
LCCGSTLFTVLTYLVDMQRFSYPERPIIFLSGCYTMVSIVYIAGFLLGDKVVCNDRFDSD
VKTVVQGTKKEGCTILFMILYFFSMASSIWWVILALTWFLSAGMKWGHEAIEANSQYFHL
AAWAVPAVKTITILAVGQVDGDVLSGVCYVGNNSVDALRGFVLAPLFIYLSLGTSFLLAG
FVSLFRIRTIMKHDGTKTEKLEKLMVRIGIFSVLYTVPATIVIACYFYEQAFREQWEKSW
VSRTCKNYAVPCPGHHQPQMSPDFTIFMIKYLMTLIVGITSGFWIWSSKTLNSWRRFYTR
LAINKQGETTV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgacaaagtttgtaggatgttttcccatttgctggttctgattatttttgca
cttttaccgcaagcagatggtcagtatggtgagcgtggaatgtctgttcctgaacatggc
ttttgccaacctatttccattcctctctgtacggatattgcctataacgagactatcatg
ccaaatttattagggcacacaaaccaagaggacgcggggcttgaagtgcaccagttttat
ccgcttgtgaaagttcaatgctctcctgacctgaagtttttcctctgttccatgtatgct
cccgtttgtacggtgctggaacaagcactgcctccgtgccgctcgctctgcgagagagcg
aggcagggctgcgaggctctgatgaataaattcggcttccaatggcctgacagcctcgcc
tgtgaatctttccctgttcacggagcgggtgagttgtgcgtcgggcaaaacgtgtctgat
agaagcgctcctattaatcctacatcagatgtaacagaatcatctcatggacagcatagg
actgtaaagggacagtttagatgcccagttgcattgaaagtacccccctatttgaactac
cgttttcttggggaggagtattgtggtgcaccttgtgagccctcaaaaccccatggcatg
atgtacttcaatgaggatgagttgaaatttgccaagatatggattggaatatggtctgtg
ttatgctgcgggtccactctgttcacggttttgacctacttggtggacatgcagaggttc
agctacccagagcgacccatcattttcctatcaggctgctacactatggtgtcaatagtc
tacatcgctggcttcttgttgggggacaaggtggtatgcaacgaccgctttgacagtgac
gtcaaaacggtcgtccaaggcaccaaaaaggagggctgcaccattttgttcatgatactt
tactttttcagcatggccagctccatctggtgggtcatcctagccttgacgtggttcttg
tcagccgggatgaagtggggtcacgaggccatcgaagccaactcgcagtacttccacctg
gcggcatgggcagtacctgccgtcaagaccatcaccatcctggcggtggggcaggtggac
ggagacgttctgagcggcgtgtgctacgtgggcaataacagcgtggacgctctccgaggt
ttcgttctggcgccgctcttcatctacctctccctgggcacctcgttccttctggcaggc
tttgtgtcgctcttccgcatccggaccatcatgaagcacgacggcaccaagacggagaaa
ctggagaagctcatggtgcgcattggcatcttcagcgtgctctacacggtgcccgccacc
atcgtcatcgcatgctacttctatgagcaggcgttcagggaacagtgggagaagagttgg
gtgagtcggacatgtaaaaactacgccgtgccatgccccgggcaccatcaaccgcagatg
tcgccagactttaccatcttcatgatcaagtacctgatgacgttgatcgtgggtatcacc
tctggcttttggatttggtcgagtaagacgctgaattcgtggaggagattttatacgaga
ctggcgatcaataaacagggtgagacgaccgtgtga
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