Oncorhynchus tshawytscha (Chinook salmon): 112229717
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Entry
112229717 CDS
T05605
Name
(RefSeq) teashirt homolog 1
KO
K09236
teashirt
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112229717
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112229717
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_4
zf-C2H2
Zap1_zf1
zf_Hakai
zf-C2H2_6
Zf-C2H2_ZNF451
DUF760
Homeobox_KN
zf-C2H2_jaz
zf-C2H2_ZNF142_18
DUF7410
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
112229717
NCBI-ProteinID:
XP_024251472
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All DBs
Position
LG31:complement(11090567..11123737)
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AA seq
1142 aa
AA seq
DB search
MPRRKQQAPRRSVAYGDEEEFKADDKIDEEHLQDDGLSLDGHDGEYLCNEDDDAGDRFSF
QNSPLSNGTNPDAGYASPLSDTSDQLIDFQSTPSKDGLDKEEEEAVRGEVEHLKVPNGLS
LQDSLAQMKAVYANLISEASWSSITMDMLRSNSNKVSSVISNSNGSSHKGSNVILNSHTN
SLVNNNNHTNSNSSSGTSAPANTTSNTSATSTANTTNTGSTGGVAYDWHQAALAKTLQHT
PYNLLPEPSLFSTVQLYRQNNKLYGPVFTGASKFRCKDCSGAYDTLVGLTVHMSESGHYR
DDNKDKEEERGKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY
QKVPLKEPMSALVSKLVPPTRKRAFQDLVSPCSPESVHNTPGVHLGETSKDQKVVNPYVT
ANNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTNSASKK
GKQLVFDPVVEENIQSIPLPPTSTRLPVSNVKSQPDSPPLHSSSTEEKREEHEENMEMSE
PEKKIKEEKEDPTEKCEKPGKAGHYKYLTEEDLEETPKGGLDILKSLEFTVSSAISKAQT
GTPTWGGAGYPSIHAAYQLHGSLKSSMQSVQVVQPLFRTSSLKMMSSDSSNLIHSPSSPS
PPPSHKNNVLAMEELVEKVTGKVTVKKEKEEKTSENKFKARSAKSPSPLSKERRGSPKVD
SLNKPVKHIAVEDQSEPRSREGEAKDNKADLSTKNGTDVPKTAVGNSCNSLGIITDHSPE
QPFVNPLSALQSIMNNHLGKASKTATPYLDPLSKLYKISNNMVEKPMNISTQVKPVQSIN
PFYDNNDQPMDLTKSKVTNGLTANSTFTTLNSTPNCNTNNSNRPILSSLSESLSSQNALM
DISDMVKNLTGRLTPKSSTPSSISEKSDADNSAFEDGLEELSAVQKRKGRQSNWNPQHLL
ILQAQFTSCLRETSDGKFVMNDLGPQERVHICKFTGLSLTTISHWLANVKYQLRRTGGTK
FLKNIDSGQPLFLCSDCASQFRTPSSYINHLESHLGFSMKDLSKLSIDHIREQQAVTRMI
TEKTFSSLGLTEEDSGSVFQCTLCNRTFVSKHAVKLHLSKTHGKSPEDHLVFVTELEKFD
KA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggagaaagcagcaagcgccaaggcggtccgtagcttacggggacgaggaggaa
tttaaggctgatgacaagatcgatgaggagcacctgcaggacgacggcctctccttagac
ggccatgacggcgagtacctctgcaatgaggatgacgacgccggggaccgattcagcttc
cagaactccccgctcagcaatgggaccaacccggacgccggctatgcctctccgctcagt
gataccagtgaccagcttattgacttccagagtactccctccaaggacggacttgataag
gaggaggaggaggcagtcagaggagaagtagaacacctgaaggtccccaacggcctgtct
ctgcaggacagcctggcgcagatgaaagccgtctatgctaacctgatctctgaggcctct
tggtccagcatcaccatggacatgctgagaagtaacagcaacaaggtcagcagtgtgatc
agcaacagcaatggaagcagccacaaggggagcaacgttatccttaacagtcatactaac
agccttgtgaacaataataaccacaccaacagcaacagcagcagtggcacctctgcccct
gccaacactaccagcaacactagcgctacaagcaccgctaatactaccaacactggcagc
accggtggagtggcctacgactggcaccaagctgctttggccaaaactcttcagcataca
ccctacaatctcctccccgagccaagcctcttcagcactgtgcagctgtaccggcagaac
aacaagctctacggcccggtgttcaccggtgccagcaagttccgatgcaaggattgcagc
ggagcctatgacacactggtggggctcacggtgcacatgagtgagtcgggccactaccgt
gatgacaacaaggacaaggaggaggagcggggaaagaggtggtccaagccccgtaagcgc
tccctcatggagatggaaggcaaggaggacgctcaaaaggtgcttaagtgcatgtactgc
ggacactcctttgaatccctgcaggacctgagcgtccacatgatcaaaacaaaacactac
cagaaagtgcctctaaaagaacccatgtcagccctcgtctcaaagctggtgccccctacc
agaaaaagagcatttcaggacttggtgtccccatgctcaccagagtctgtccacaacaca
cctggtgtacacctgggagagacatcaaaagaccagaaagtggttaacccctatgtcaca
gcaaataaccgctacggctaccaaaatggcgccagttacacctggcagtttgaggcgcgt
aaggcccagatcctcaaatgcatggagtgcgggagttcccacgacaccctgcaacaactg
acagcccacatgatggtcacaggacactttctgaaagtgaccaactcggcgtccaaaaag
gggaagcagttggtgtttgaccccgtggttgaggaaaatatacagtccattcctctccct
ccgacctctacacgactcccggtgtccaatgtgaagtcacagcctgattctcctcccttg
cactcctcctccactgaagagaaaagggaggagcatgaggagaacatggagatgagtgaa
ccagagaagaagatcaaagaggagaaagaggatccgactgagaaatgtgagaaacctggc
aaggctggacattacaagtatctcacagaggaagacctagaggagactcccaaaggaggt
ctggatatcctgaagtccttagagttcactgtgtcaagtgcaatcagcaaggcccagact
ggcacgcccacttggggtggtgctggctatcctagcatccacgctgcctaccagctccat
gggtctttgaagtcctccatgcagagtgtccaggtggttcaacccttgttcaggactagc
agcttgaagatgatgtcctctgactccagcaatctgatccactctccgagcagcccttcc
ccacctccaagccacaagaacaatgtgttggccatggaagagctggtggaaaaagtcaca
gggaaggtcactgtgaagaaggagaaggaggaaaagacttctgaaaataaattcaaagcg
agatctgccaagtcaccctctccactgtccaaggagaggaggggctcacccaaggtggat
agcctcaacaagccagtgaaacacattgctgtagaggatcagagtgagcctagaagcaga
gagggagaggcaaaagacaacaaagcagatttgtcaacgaagaacggaacagacgtgcca
aaaacggcagttggaaacagctgtaacagcttgggaatcatcactgatcactcaccggag
cagccttttgtcaaccccctcagtgcgttgcagtccatcatgaacaatcacttgggaaag
gcctcaaagacggccaccccctatctagaccctctgtcgaagctgtacaagatcagtaac
aacatggtggagaagcccatgaacatctccactcaggtcaaaccggttcagtcaatcaat
ccattctatgacaacaatgaccagcccatggacttgacgaaatccaaagtcactaacgga
ctaactgcgaacagtaccttcactacactaaacagcactcccaactgtaataccaataac
agcaacagacccatcctctcaagcttgtctgaatctctgtcgtcccaaaatgctttgatg
gacatctccgacatggtcaagaacctgactggccgtctgacgcccaaatcctccactccg
tcctccatctcggagaaatctgatgcggacaacagcgcctttgaggatggcttggaggag
ctctctgcagtccagaaaaggaaaggccggcagtccaactggaatcctcagcacctcctc
atccttcaggcccagtttacctcctgtctccgggagacgtctgacggcaagttcgtcatg
aatgacctaggcccccaggagcgggtccacatctgcaagttcaccggtctctccttgacc
actatctcccattggctggccaacgtcaagtaccagctgaggcggacaggcgggacaaaa
ttcctgaagaacattgactcgggccagcccctgtttctgtgcagtgactgtgcctctcag
tttaggactccttcctcttacataaatcatttggagtcccacttaggctttagcatgaag
gacctctccaagctttcaatagatcacattagggagcagcaggcagttaccagaatgata
acagagaagactttcagttccctgggacttaccgaggaagactcgggctctgtatttcag
tgcacgctttgcaatcggacctttgtcagcaagcacgcggtcaagcttcaccttagcaaa
acgcacggcaagtcgccggaggaccacctcgtctttgtcactgaactagaaaagtttgat
aaagcctag
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integrated database retrieval system
