Oncorhynchus tshawytscha (Chinook salmon): 112229754
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Entry
112229754 CDS
T05605
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112229754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229754
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112229754
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
112229754
NCBI-ProteinID:
XP_024251535
LinkDB
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Position
LG31:9868022..9888706
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AA seq
569 aa
AA seq
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MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSELEQELACQ
NDHSSASQNVRRLLQNPRVSEMDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSEKHC
RMVTSMVEYGGKRVRGSDLVNPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSHFPYLGPSSLRDRPQDIIVFVIGGATYEEALAIYNLNRTVPGVRIVLGGTTIHNT
KSFLEEVTLTAAAGQAERLQRAGGHPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcggacca
gggatgaaggttctgctcatggataaagagacgaccagcatcgtcagtgtggtctacact
caatctgagatactacagaaggaggtctacctgttcgaaagaatcgactcacagaatcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgacccaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggccgaggcggatgaacaggaggtggtcgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacaccttttctccctcaac
ctcagtggtgtggcaaggggtcgtagctgggagccaactctcctgccacgtaccacccag
ggtctgacctcggtgctgctggccctgaaaaaatgtcccatgatccgctaccagctgtcc
tcagacatggccaagcgactgggagagagcgtgaagcaaataatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcttggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtgcacgagctgctt
ggcctcaacaacaaccgcattgacctgtccagagtcccagggatcagcaaggacctgaag
gaggtggtgctatctgcagagaatgatgagttctatgccaataatctgtacctgaacttt
ggagagattggcacaaacatcaagaacctgatggaggactttcagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaagcgtttgtagacaactacccccag
ttcaaaaagatgtcgggtacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
ctggtgagcgagaggcacctgatggaggtgtcagagctggagcaggagctggcctgccag
aatgaccactcaagcgcatcacagaatgtgcgtcggctgctgcagaacccgcgggtgagc
gagatggacgcggttcgcctggtgatgctgtacgcactgcgctacgagagacacagtagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaagcattgc
aggatggtaacgtccatggtggagtatggagggaagagggtgagaggaagtgacctcgtc
aacccccaagatgcagtcgccatcaccaaacagttcttcaaggggctgaagggagttgag
aatgtatacacgcagcatgcaccgttactgcaggagaccttggaccagctgattaagggg
cggctgaaggacagtcatttcccctacttaggacccagctcccttagagacaggccacag
gatatcatagtctttgtcatcggaggggccacctatgaggaggcactggcgatctataac
ctgaaccgcaccgtgcctggggttcggatcgtactgggcggcaccaccatccacaacacc
aagagcttcctggaggaggtgacattgacggcggctgcaggccaggccgagaggctgcag
agggcgggtggtcatccaaacagacgctga
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