Oncorhynchus tshawytscha (Chinook salmon): 112229764
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Entry
112229764 CDS
T05605
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112229764
03029 Mitochondrial biogenesis [BR:
otw03029
]
112229764
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
112229764
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
112229764
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
TC1
Motif
Other DBs
NCBI-GeneID:
112229764
NCBI-ProteinID:
XP_024251551
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Position
LG31:complement(9681093..9695223)
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AA seq
426 aa
AA seq
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MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQHGHYSTAEVLLRA
GVSRDARTKVDRTPLHMAASEGHTVIVDLLVRSGADINAKDMLKMTALHWAAQNGHQRVA
ETLVKHGADVHALSKFDKTPFDIAGDIQNADLMLLLQEGMQNQVNMNAEAGMTGSSAQPQ
FIIQGIPGLQGGVVNLADLLNNAAKANSGRLQGGVVNLADLLNNAAKANSAVESEEAIAA
NSLDPGSIQHMVNEQGQRVITIVTDQHGNLQTGGLGQPFFVTMQHGQQMLAMPANQVTEE
VVDEEPQPPPSRKRKLEASANHMESGDTEQLQRQLQEANRKAQEYRQQLMCKEQEAEQYR
MKLEAMSHSHTNGTSEQEEVIGGEEEVQEEVMLQEGDIIIKTEGLDSAEEQVTLVDSAPS
HTEVIS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtggatttggggaagcggctacttgaggctgcacggaaaggccaggacgat
gaagtcaggacactcatggccaacggggctcccttcaccacagactggctgggtacatct
ccgttgcacttggccgcccaacacggacactattccaccgccgaggtgctgctcagagca
ggtgtcagcagggatgcccgaaccaaagtggacaggacccctctgcatatggccgcttca
gagggccacaccgtcatcgtggatctattagtcaggagtggagcagacattaatgccaaa
gacatgttgaagatgactgctctccactgggccgcccagaacggccaccaaagggtagcg
gagacgctcgtcaaacatggcgcagatgttcacgctctcagtaaattcgataagacgcca
ttcgacatcgcaggagacatccagaatgcagaccttatgctcctactacaggaaggaatg
cagaaccaggtgaacatgaacgcagaggctggcatgacggggagctcggcccagcctcag
tttatcatccagggcatcccagggctccaggggggcgtggtcaacctggcggacctcctc
aacaacgctgccaaggccaactctggtaggctccaggggggcgtggtcaacctggccgac
ctcctcaacaacgctgccaaggccaactctgcagttgaatctgaggaagccatagcagcc
aattctttggacccgggcagcatccagcacatggtgaacgagcaaggtcaaagggttatc
accatagtgaccgaccaacacggcaacctgcagactggagggcttggtcagccattcttt
gtcaccatgcagcacggacaacagatgttggcgatgccagccaatcaggtgacagaggag
gtggttgatgaggaaccccagcccccgccctctcgcaagaggaaactggaggcctcggcc
aaccacatggagtctggagacacggagcagttacagaggcagctgcaggaggccaaccgg
aaggcccaggagtaccggcagcagctgatgtgcaaggagcaggaagcagagcagtaccgc
atgaagctggaggcaatgtcgcacagccataccaacggcacctcggagcaggaggaggtg
attgggggtgaggaggaggtgcaggaggaggtgatgctccaggagggagacatcatcatc
aagacggaggggctggactcggccgaggagcaggtgacgctggtggactcggcgccctcc
cacaccgaggtcatctcataa
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