Oncorhynchus tshawytscha (Chinook salmon): 112229797
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Entry
112229797 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A isoform X2
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112229797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112229797
03036 Chromosome and associated proteins [BR:
otw03036
]
112229797
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112229797
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112229797
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
112229797
Noncanonical PRC1 (PRC1.1)
112229797
Noncanonical PRC1 (PRC1.3/1.5)
112229797
Noncanonical PRC1 (PRC1.6)
112229797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
zf-RING_5
zf-RING_4
RING_XB3-XBAT31
zf-rbx1
zf-UDP
TRAF3_RING
zf-C3HC4_5
Sina_RING
Zn_ribbon_Top1
Motif
Other DBs
NCBI-GeneID:
112229797
NCBI-ProteinID:
XP_024251617
LinkDB
All DBs
Position
LG31:8611014..8614483
Genome browser
AA seq
375 aa
AA seq
DB search
MVTPVNIQNPSKTWELSLYELHRSPQEAIMDSTEIAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAH
QDRVLERLNQQHNNRILSSSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGEDNGDTRSH
LSHDSAPSHVLLPPSHTPPEAGHTRNPKRPRESDGSVPEVDGGSPAPPVRRHKESPGSEI
ELVFRPHPLLVNTQDYSQTRYVKTTANATVDHLSKYLALRIALEDRQRDSQSDAGTEKEG
GAKGGDAAEGASLKNISEKQYTIYIPTSGGQFSTLNGSLTLELVNEKYWKVRKPLELYYA
PTKDQQPQPPQPKEV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccccagtcaacatccaaaaccccagtaagacgtgggagctgagcttgtatgag
ctgcacaggagcccacaggaggcaatcatggacagcacagagatagcagtgtcccccagg
agcctccacagtgagctgatgtgccccatctgtctggacatgctgaagaacaccatgacc
accaaggagtgcctgcaccgcttctgctccgactgcatcgtcactgcactccgatcaggg
aacaaggaatgccccacgtgccgaaagaagctggtgtcgagacgctcattgcgccgtgac
tccaacttcgacgccctcatctcaaagatctaccccagccgggacgagtacgaggcccac
caggaccgggtgctggagagactcaaccaacagcacaacaatcggatactcagctccagc
atcgaggaggggctacgcatgcaggcacttcacagagcccagcgagtgcgcaaaccggcg
caggagagcgacaacacaacattcagtggtggcgaggacaacggggacacacggtcacac
ctctcccacgattccgctccctcccatgtgctcctccccccgagccacaccccccctgag
gccgggcacacccggaaccccaagcggcccagagaatcggacgggtcggtcccggaggtg
gatgggggcagccccgcgccaccagtccgccgccacaaagagagccccggctccgagatt
gagttggtgttccgcccacatcccctgctggttaacacacaggactacagccagaccagg
tatgtgaagaccacagccaatgcaacagtggaccacctgtctaagtacctggctctgcgt
atcgctctggaggacagacaaagagacagccaatcagatgcagggacagagaaagagggg
ggtgctaaaggaggggacgcagcagaaggggccagcctgaagaatatcagtgagaaacaa
tacaccatctacattcccacatcagggggccagttctctactctcaacggctccctgact
ctggagctggtaaatgagaagtactggaaggtcagaaagcctctggagctctactatgcc
cccaccaaggaccaacagcctcagcccccacagcccaaagaggtgtga
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integrated database retrieval system
