Oncorhynchus tshawytscha (Chinook salmon): 112229816
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Entry
112229816 CDS
T05605
Name
(RefSeq) raftlin isoform X1
KO
K27926
raftlin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229816
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112229816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raftlin
Motif
Other DBs
NCBI-GeneID:
112229816
NCBI-ProteinID:
XP_024251653
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All DBs
Position
LG03:complement(20046860..20113399)
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AA seq
708 aa
AA seq
DB search
MGCGLRKLKPSEESSPGKIYSTLKRPQVETKVGVAYTYQYVDFLVGKYDGSSTLCLSSVR
ELPAQLQDLYQQGFSLVAVHPFIHPCGSDAVSPQHQLYRAVLIRLDDGLEKSQSSCAPYR
LQLEQCLSTDQVPTPELIQGYVKKQIQEAADQGVMFVGFIQEPCGVRGTQTREPETPSLS
LHSSPSSVLGSLSSRSPTSPRTNGEPGAQEQAMDTGGDEDQGSLCKGGEDQTRDTGGSET
AVGESNHDGRSSLPITPSTESEQDQDVIVEDTLTHNNNKANFVELKEKPSCHTQRASGVE
LLALFNHPTDREGQLKYYTGKVPLRVQLRDEGVKGVEANWLDHMTQHFNNGASLVDGYFH
LGNDNDLQPKSVESVFIFQEGTEGGDQSVTTTYDAIVVEQWTVIDGLQVKTDYVPLLQSL
AMYGWRLTCVLPTPIIKTNSDGSLATKQVVFLQRPVLPRKRGDSKKLIFKSKANKNSVKD
ASKTKKKKKKKNKQSAAEKDLEESKVLDDGEKMVKESRNVKENKGSEEETVKETEVEAVC
KEAEAPCEVEEEEKVEAETEEGVETGKERDGAAGKDDKSDKEGRVEEGEGAGAETEQERR
GERENVLAIDDETETTKASEVEVETKEQGQKEEKGGGAGMEVKEHGVETKEETNGGEENG
ETENVAMQQDPPDQEEHVVEEKVQKVVKEDGQVKLTNRCPEESQRSDV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtggactgaggaagctgaagccatcagaggagagcagtccagggaagatctac
tccaccctgaagagaccacaggtggagaccaaggtgggcgtggcctacacataccaatac
gtcgacttcctcgtagggaaatacgatggctcatctacactgtgtctttcgtctgtgcgg
gagctcccagcccagctccaggacctgtaccagcagggcttctccctggttgccgttcac
cccttcattcatccctgtggttccgacgcagtcagcccccagcaccagctctacagagcc
gtgctgatccgactcgatgatgggttggagaagagccagtcgagctgtgctccctaccgt
ctgcagctggagcagtgtctgtctaccgaccaggtgcccacccctgagctcatccagggc
tatgtcaagaagcagatccaggaggctgcagaccagggggtcatgtttgtgggcttcatc
caggagccgtgtggggtacgaggtacccagaccagagaaccagagacgccctccctctcc
ctccactccagccccagttccgtgctaggctccctgagcagccgaagccccactagcccc
cggaccaatggagaaccaggagcccaggagcaggcgatggacactgggggcgatgaggac
caaggctccttatgtaagggtggggaggaccagactagggacacgggggggagtgagact
gctgtcggggaaagcaaccatgatggaaggtcctctcttcccataacaccatccacagag
agcgagcaagatcaggatgttatagtggaagacacactgacacacaacaataacaaggca
aactttgtggaactgaaggagaaaccaagctgtcacactcagagagccagtggggtggag
ctgctagccctgttcaaccacccaactgaccgtgagggccaactgaagtactacactggg
aaggtaccgctgagggttcaactccgtgatgagggggtcaaaggggtggaggccaactgg
ctggatcacatgactcagcacttcaacaacggggcctcactcgttgatggatacttccac
ctgggcaacgacaacgatttgcagcctaagtcggtggaaagcgtcttcatcttccaggag
gggacggagggcggcgaccagagcgtgaccaccacgtacgacgccatcgttgtggagcag
tggactgtcattgacggcctgcaggtgaagacagactatgttcccctgctccagtctctt
gccatgtacggttggagactaacgtgtgtgcttcctacacccatcatcaagaccaacagt
gatggaagtttggccaccaagcaggtcgtttttcttcagagacctgtccttccccgcaag
aggggggactccaagaaactgatattcaaaagcaaggccaacaagaactctgttaaagac
gcgtcaaaaaccaagaagaagaagaagaagaaaaacaagcaatcggcagcagagaaagat
ctggaagagtccaaggttcttgacgacggggaaaagatggtcaaagagagcaggaacgtg
aaggaaaacaaggggagcgaagaggagacagtgaaagagacggaggtagaggctgtgtgt
aaagaggcggaggctccctgtgaagtggaggaagaggaaaaggttgaggcagaaactgag
gaaggggtagaaactgggaaggagagagatggagctgcaggaaaagatgacaagagtgac
aaagaggggagagtggaggagggagaaggagcgggggcagagactgagcaggaaagacgg
ggagagagagaaaatgtgctggcaattgatgatgaaaccgaaactaccaaggcttcagag
gtggaggtggagaccaaagaacaagggcagaaagaggagaaagggggaggagctggaatg
gaagtgaaggaacatggggttgagactaaggaagagacaaatggaggggaagagaatgga
gaaacggagaatgttgccatgcaacaagacccacctgaccaggaagaacatgtagtggag
gagaaggtgcaaaaggtagtaaaggaggatggacaggtcaaattgaccaatcgatgccct
gaagagagtcaaaggtctgatgtgtaa
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