Oncorhynchus tshawytscha (Chinook salmon): 112229874
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Entry
112229874 CDS
T05605
Symbol
rab5ab
Name
(RefSeq) RAB5A, member RAS oncogene family, b
KO
K07887
Ras-related protein Rab-5A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04144
Endocytosis
otw04145
Phagosome
otw04148
Efferocytosis
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112229874 (rab5ab)
04145 Phagosome
112229874 (rab5ab)
04137 Mitophagy - animal
112229874 (rab5ab)
04148 Efferocytosis
112229874 (rab5ab)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112229874 (rab5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229874 (rab5ab)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112229874 (rab5ab)
04031 GTP-binding proteins [BR:
otw04031
]
112229874 (rab5ab)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
112229874 (rab5ab)
Endosome - Lysosome transport
112229874 (rab5ab)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112229874 (rab5ab)
Exosomal proteins of other body fluids (saliva and urine)
112229874 (rab5ab)
Exosomal proteins of colorectal cancer cells
112229874 (rab5ab)
Exosomal proteins of bladder cancer cells
112229874 (rab5ab)
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
112229874 (rab5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
DUF1327
Motif
Other DBs
NCBI-GeneID:
112229874
NCBI-ProteinID:
XP_024251760
UniProt:
A0A8C8D872
LinkDB
All DBs
Position
LG03:20460311..20467656
Genome browser
AA seq
216 aa
AA seq
DB search
MASRGGATRPNGPNTGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYAEDNSLLFMETSAKTSMNVNEMFMAIAK
KLPKNEPQAAGANSGRNRGVDLTETAQPASRSCCST
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaggggtggtgcaacacgacccaatgggccgaacacagggaacaagatctcc
cagttcaaattagtactcttaggggagtccgctgtgggaaagtccagtctggtacttcgt
tttgtcaagggccagtttcatgaattccaagagagcacaattggagctgccttcctgact
cagacagtatgtttggatgacacaacagtcaagtttgagatctgggacacagctggtcag
gagcgctaccacagcctagcacccatgtactacagaggtgcccaggctgccatcgtggtc
tacgacataactaacaaagagtcctttgcacgagcaaagaactgggttaaggagcttcag
agacaagccagtccaaatattgtaatagcgttggctgggaacaaagctgaccttgcaaac
aaacgagcattggattttcaggatgcccagtcatacgcagaggataacagtttactgttc
atggaaacatcagcaaagacctctatgaacgttaatgagatgttcatggctattgcaaag
aaattacccaagaacgagcctcaagctgccggagcgaacagtggacggaaccggggagtg
gatcttacggagacagctcagccagccagccgctcctgctgcagtacctaa
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integrated database retrieval system
