Oncorhynchus tshawytscha (Chinook salmon): 112229903
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Entry
112229903 CDS
T05605
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112229903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112229903
03016 Transfer RNA biogenesis [BR:
otw03016
]
112229903
03012 Translation factors [BR:
otw03012
]
112229903
04131 Membrane trafficking [BR:
otw04131
]
112229903
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112229903
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112229903
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112229903
Translation factors [BR:
otw03012
]
Eukaryotic type
Elongation factors
112229903
Membrane trafficking [BR:
otw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112229903
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112229903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
112229903
NCBI-ProteinID:
XP_024251805
UniProt:
A0A8C8H7I0
LinkDB
All DBs
Position
LG31:6206408..6210360
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGASGVTLLEALDSILAPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAIKATKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacattgtggtcattggccatgtcgactccggaaag
tcaaccaccacaggtcatctgatctacaaatgcggaggcattgacaagagaaccattgaa
aagttcgagaaggaagccgctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagagggagcgtggtatcaccattgacatttctctgtggaagttc
gagaccgccaagtactacgtcacaatcattgatgcccctggacacagagactttatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctgattgttgccggtggtgtg
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgctctcctcgcc
tacactctgggagtgaaacagctcattgttggagtcaacaagatggactctactgagccc
ccctacagccagaagcggtttgaggagatccagaaggaggtcagcacctacatcaagaag
attggctacaaccctgccactgtcgcctttgtgcccatctctggttggcatggggacaac
atgctggaggctagccccaacatgggctggttcaagggatggaaggtcgaacgtaaggag
ggtggcgctagcggtgtgacccttctggaggctctggactctatcctggccccctcccgc
cccactgacaagcccctccgtctgcccctgcaggacgtctacaaaatcggcggtattgga
acagtacctgtgggccgtgtggagactggcaccctgaaggccggtatgatcgtcaccttc
gcccccgctaatgtcaccactgaggtgaagtctgtggagatgcaccacgagaccctggaa
gcggctctacccggtgacaatgtcggcttcaacgtcaagaacgtatccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaagaatgaccccccaatggaggccggcaacttc
acagctcaggtcatcatcctgaaccaccccggcaccatctcccagggctatgcccccgtg
ctggattgccacaccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaagccctgaaatctggagacgccgcc
atcattgtcatggtgccaggaaagcccatgtgtgtggagagcttcgctgcctaccctccc
cttggtcgttttgccgtgcgcgacatgagacagaccgttgccgttggtgtcatcaaggcc
gttgacaagaaggctgccagcactggcaaggtgaccaagtctgccattaaggccaccaaa
gccaaatga
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