Oncorhynchus tshawytscha (Chinook salmon): 112229911
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Entry
112229911 CDS
T05605
Name
(RefSeq) transcription factor AP-2-epsilon isoform X1
KO
K09179
transcription factor AP-2 epsilon
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112229911
Transcription factors [BR:
otw03000
]
Eukaryotic type
Other basic domains
AP-2 (bHSH)
112229911
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TF_AP-2
Motif
Other DBs
NCBI-GeneID:
112229911
NCBI-ProteinID:
XP_042166470
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All DBs
Position
LG31:complement(6071052..6082953)
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AA seq
490 aa
AA seq
DB search
MSLCDSYKTPASLLQLTHSSVYLQLVFIHPPVARYNPRSKRNSNLCNPDTLYSKVIMLWK
SRTKTEPYCQDRADGLTGSSPSGRLSQLSSLNQAAYSSAPPLCHTPASDFQPPYFPPPYP
QSSLSYSQSQDSAYSHLSDPYTSINSIHQHQQAAWHSQRSRADEGGLLSQSHRALSLDHR
REYPGVPRLLHGLGEGAAALGDGPLGMHIGHHGLEDMQVGLFGMEEGSALGILDHSVIKK
VPIPSKLNGSSLSALHLSKDGLGMGSVSNPGEVFCSVPGRLSLLSSTSKYKVTVGEVQRR
LAPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTALVEGEA
VHLARDFGYVCETEFPARATAEYLCRQSDPEQLPTRRSMLLATKEICKEFVDLMSQDRSP
LGASRPNPCLEHGVQSNLTHFSLLTHGFGTPAICAALSAFQSYLVEAIKMLDKDQGGGKG
HHEKEMKHRK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtgtgactcatacaaaactcctgcgtcgctactccaactaactcactcatca
gtctaccttcagctcgtctttatccatcctcctgttgcccgctataacccccggtccaaa
cgtaactccaatctctgcaacccggacaccctttacagcaaggtcatcatgctttggaaa
tctcgaacgaagactgagccctactgtcaggaccgcgcggacggactgaccggttcctcg
cccagcgggcgactgtcccaactctcctcgctgaaccaggcagcttactcctcggctcca
ccgctctgccacacaccggcctctgacttccaacctccgtacttcccccctccataccca
cagtcttcgctctcatactcacagagccaggactctgcatactctcacttatcggacccc
tacacctccatcaactccatccatcagcatcagcaagcggcatggcactcgcagaggtcg
cgagcggacgagggggggctattgtcacagtcacaccgggctttaagcctcgaccaccgt
cgggagtaccccggtgtaccccggcttctccacggacttggggagggtgccgcagcgcta
ggggacgggcctcttggaatgcatattggacatcacggactggaggacatgcaggtgggt
ttatttggaatggaggagggatcagccttgggcatcctggaccactccgtcattaagaaa
gttcccatcccctccaagctgaacggctcgtccctgtcggctctccacctcagtaaggat
ggtctagggatgggttccgtgtccaacccgggggaggtgttctgctccgtccccggccgc
ctctccctcctcagctccacctccaagtacaaggtcaccgtgggggaggtgcagcgacgg
ctggccccgcccgagtgcctcaacgcttccctgttgggcggagtcctgcgcagggcaaag
tcaaagaatggtgggcgctgtctgagagagcgtctggagaagattgggctcaatctcccc
gctgggcggcgcaaggcagccaacgtcaccctcctgacggctctagtggagggtgaggca
gtccacctggcccgtgactttgggtatgtgtgcgagacggagttccctgccagagcgaca
gcagagtatctgtgtcggcagagtgaccccgagcagcttcccacacgacgcagtatgctg
ctggccaccaaggagatctgcaaggagtttgtggacctgatgtcccaggaccgctctcct
ctgggggcgagccgtcccaacccctgtctggagcacggggtccagagcaacctcacccac
ttcagcctactcacccacggcttcggcacccctgctatctgcgccgccctctccgccttc
cagagctacctggtggaggccatcaaaatgctggacaaggaccaggggggtggcaagggg
caccacgagaaggagatgaagcaccgcaaatag
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