Oncorhynchus tshawytscha (Chinook salmon): 112229947
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Entry
112229947 CDS
T05605
Name
(RefSeq) sialidase-1
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00511
Other glycan degradation
otw00600
Sphingolipid metabolism
otw01100
Metabolic pathways
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112229947
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
112229947
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112229947
Enzymes [BR:
otw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
112229947
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Motif
Pfam:
BNR_2
BNR_3
BNR
Tli3
Motif
Other DBs
NCBI-GeneID:
112229947
NCBI-ProteinID:
XP_024251879
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Position
LG31:complement(4276197..4298409)
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AA seq
389 aa
AA seq
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MVTRAGLMGVRSWIALLFSVLSSSRCTSFGQIDPLVYDEQLLWVRGGAGEVDTYRIPLLS
FTPKGSLLAFAEARKKSACDVGAKFLAMRRSTDRGATWSPTTFIVNDGVLADGLNLGSVV
VDEETGSVLLIYSLCFHQYQCDPASIMLVESMDDGLSWSPPRNLSVQLGVKNFVPGPGFG
IQKHYPPAKGRLVVCGHGTLEGDGVFCILSDDHGRNWRNGAALKSIPYNQPKQALDFNPD
ECQPVEMEDGSIVINVRNQNNYHCRCRMVVRSLDGGETLPLEQLLFDSTLIDPVVAAGAL
QKEGVMYFTNPADSTHRVNLTLRWSLTNGTSWEKKAVQIWAGPSGYSCMTSLTSGGAEDR
KFIFVIYEKGHKDYYETISFAKIHLYGGL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggtcacaagggctggtttgatgggagtacgaagctggatcgcattacttttttcagtt
ctatcgtcaagtcgatgcacctcttttggccagattgaccccctggtctatgatgagcaa
ttgctgtgggtgaggggcggggcaggagaggtggacacttaccggatcccactgctctcc
ttcacccccaagggcagtctgctggccttcgctgaggcccggaagaagtccgcctgtgac
gtgggggccaagttccttgccatgcgacggtccacagaccgaggtgccacgtggtctccc
accaccttcatagtaaacgatggcgtcctggctgacggactgaacctcggttcagtggtg
gtggatgaggagactggctctgtgctactgatctactctctgtgcttccaccagtaccag
tgtgaccccgccagtataatgctggtggagagcatggacgacggactcagctggagccca
ccaaggaacctctcggtccagctgggggtcaagaacttcgtccctgggcccggcttcggc
attcagaagcactaccctcctgctaaggggcgtctggtggtgtgtggacatggcaccctg
gagggtgacggggtcttctgcattctgagtgacgatcacggacgaaactggaggaatggc
gccgcgctgaagagcatcccctacaaccagcccaaacaagccctggacttcaacccagat
gagtgccagcctgtagagatggaggacggtagcatcgtcatcaacgtgcgcaaccagaac
aactaccactgccgatgtcgcatggtggtgcgcagcctggacgggggtgagacgctaccc
ttggagcagctgttgtttgactccaccctgatagaccctgtggtagcggcaggggcgctg
cagaaggaaggcgtgatgtacttcaccaacccagctgacagtactcacagggtcaaccta
accctgcgctggtctctgaccaatggcacgtcgtgggagaagaaggccgtccagatctgg
gcggggccaagcggctactcctgtatgacatcacttacgagcggcggcgcagaggacagg
aagtttatcttcgtcatctacgagaaaggccacaaggactactatgagaccatctccttt
gccaagatccacctctacggtggactgtag
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