Oncorhynchus tshawytscha (Chinook salmon): 112229959
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Entry
112229959 CDS
T05605
Name
(RefSeq) CUB domain-containing protein 1 isoform X1
KO
K06732
CUB domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
otw04090
]
112229959
CD molecules [BR:
otw04090
]
Proteins
112229959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB_CDCP1_2
CDCP1_CUB_6
CUB_CDCP1_1
CUB_CDCP1_4th
Dicty_CTDC
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
112229959
NCBI-ProteinID:
XP_024251898
LinkDB
All DBs
Position
LG31:complement(3981872..4023836)
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AA seq
1037 aa
AA seq
DB search
MRLTKKCARALLGIVTLLLNLSECLRMTVRPDKDATVTVSSSLLLPLEQCSVCKVNGTEN
DTQTTCHSSLALVPDEDVTLLFNCTEPPQSAFVIQIHRKIECTNDTCSPATGVAQPSLFS
EFIRTLVWDLSVLEKTVMNLDFPVDRLKEMTESELCQDGYQYTVTRTNTEREVKTQTYCK
NGLVAHLHIPSQATVSLQVPKGREVDSSIFTAKPIKKQTRMISVTPEPDTIVTISRNTKA
KECSVCVGEGPTCNPKELVLRAARNTSVKFTCPQPQDVFSVEINREIDCTEITCSGNIVQ
TESSLFPDFNRTFTWDLKVPPGLSFQLDFPSPGMRQIPPPETCPDEHTYTIITYQRTGLS
TIGIFCPGGSITRIQVLYKGRVSLQVPGDRKLEPLDFKVTVGPEIKMLAVVKVNLPRGVS
DTDFLSANYPRGFPDDDLMRWDFTVPGMHNYTVNFLNHTESLCQKKEVMVMYHKARGKVG
IQKTLADPQPTHRQGSFTMTLFNCETDRTKPGLSLKFRVSVMRSGHPVLCTVNLSEDEGL
VLHFEKRGSDPYCEMRKDSMLQEKITVPSGTKARLSFLDCPSEDLRLTSVKTIGCRSLDS
CSVTGTLLTVPKMPTCLPTLLQSFTWHLIIPVYGTVDLLSPTGNLRQSLPGQECNGSVSL
HVAEGDGSSIGYFCSEGIIRKIQVHSNVSITATAKDLSLIQGPFLNVSFSEKISDSIIYT
VQPGMGSPALLATPNWPSGMKPYSTVSWIINLPGHLQADLLLTNISQPKCGKGHTFIKVQ
TLGSPEELLSRREDKEAEDKLMVPESFYLNMSNCMPENGHFSVLSKVTLQKTSQLLLSGI
LGAVGAVLLLMLIVLTVFLVFRKKKRAMVKEASICIGKGNIFIPGDHVFPKTQSDSESHV
YASIEDTMVYSHLLREPSYVGAIQDHFQGQPVDTYRTFMALQDGVPEITETAAEHEPELV
PEMDEYRPFLDPSETFIPSRPRTPIDRQDSMGFMDRRMVDNELYTFKSTGDINTIRLSGA
NQILDPETFDSKGEESI
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcacaaaaaaatgcgctcgagcgctcctgggaattgtgactttgctcctcaac
ctgtcagaatgtctgcgcatgaccgtccgccctgacaaagatgctactgtgactgtgtcg
tcctcactgctccttccattggaacagtgttccgtatgcaaggtcaatggcactgagaat
gacacccagacgacctgtcactcatcgctggccctggtccccgatgaggatgtcaccttg
ctcttcaactgcactgaaccaccacaaagtgctttcgtcatccagatccacaggaaaatc
gaatgcaccaatgacacctgcagccctgccacaggtgtggctcagccttccctcttctca
gagttcattagaacactcgtctgggatctaagtgtgctggagaagaccgttatgaatttg
gacttccctgttgacaggctgaaggagatgactgaatcagagttgtgtcaagatggctac
cagtacactgtaaccaggaccaacactgaacgagaggtcaaaactcagacatactgcaag
aatggcctcgtggctcaccttcatataccgagccaagccacggtgtctttgcaagttcca
aaaggcagagaggtggattcctctatatttacggccaaaccaataaagaaacagacccgg
atgatctccgtgactccagagccagacactatcgtcaccatcagcagaaacaccaaagcc
aaagagtgcagtgtgtgtgttggggaggggcctacctgcaaccccaaagaactcgtcctg
agagctgcccgcaacacctctgtgaagttcacctgcccacagccacaagatgtcttcagt
gtggagatcaacagggagattgattgcacagagatcacctgcagtgggaacatcgtccag
acggagtcctccctcttcccagacttcaacagaaccttcacctgggacctgaaagttcca
cctggcctttccttccagctggacttcccatcgccgggaatgagacagattccaccccct
gagacctgtcctgacgagcatacctacaccatcatcacgtaccagcgcaccgggctctcc
accatcggcattttttgcccaggcggcagcatcactaggatccaggtgttgtacaagggc
cgggtgtccctgcaggtccctggggacaggaagctggagccgctggacttcaaggtcacc
gtcggaccggaaattaaaatgctggctgtggtaaaagtcaacctacctcgaggggtgtca
gatacagacttcctctcagccaactaccctagaggtttccctgatgacgacctgatgagg
tgggacttcacggtgcccggcatgcataactacacggttaacttcctgaatcacacagag
tctctttgccagaagaaggaagtgatggtgatgtaccacaaggcgcgtgggaaggtgggc
atccagaagaccctggcggacccccagccaacacacaggcagggcagcttcaccatgacc
ctatttaactgtgagacagacaggaccaaaccgggcctgtccctcaaatttagggtctca
gtgatgaggagcggccatccagttctctgcactgtaaatctgtcagaggatgaagggcta
gttctccactttgagaagaggggatctgacccctactgtgagatgaggaaggactctatg
ctccaggagaagatcacagttccctcagggaccaaagccaggctttctttcctggactgt
ccaagtgaagacctacgtctgacatctgtaaaaaccataggatgccggagtttagactcg
tgctccgtgactgggactctcctcacggtccctaaaatgccgacgtgcctccctacgcta
cttcaaagcttcacctggcacctcattatcccagtatatggcactgtggatttactgtcc
cccacaggaaacctcaggcagtccctgccaggacaggagtgcaatggcagtgtctccctt
cacgtagcagagggtgatgggtcctccattggctacttctgctccgaaggcatcattcgc
aaaatccaagtgcactccaacgtctctattactgccacagcgaaggaccttagcctgatt
caagggcctttcctcaatgtgtccttcagtgaaaaaatctcagacagcatcatatataca
gtccagcccggaatgggttcccctgccctcctggccaccccaaactggcccagtggcatg
aagccatactccaccgtgtcctggatcatcaatctgccgggccacctccaggccgacctg
ctgttgaccaacatcagccagcccaagtgtggcaaggggcacacgttcatcaaggtgcag
accctgggctctccagaggagctattgagtcgaagggaggataaggaggcagaggacaag
ctgatggtccctgagagcttctacctcaacatgtccaactgtatgccggagaatggacac
ttcagtgtgctcagcaaggttaccctgcagaagactagccagctgctcctgagcggcatc
ctgggtgctgtgggagcagtgctgctccttatgcttattgtgctgacagtcttcttggtg
ttcaggaagaagaaaagagcgatggtcaaagaggcttccatctgcatagggaaagggaat
atcttcatcccaggcgatcatgtgttccccaaaactcagtcggacagcgagtctcacgtt
tacgcctccatcgaagacaccatggtgtacagccacctgttgcgcgagcccagctacgtg
ggcgccatccaggaccacttccaaggacagccggtcgacacctatcggacgttcatggcg
ctccaggatggagtgccagagatcacagagacagctgcagaacatgagcctgaactggtg
cctgagatggacgagtatagacctttcctggacccgtcggaaaccttcatcccgtcgaga
cctcgcacgcccattgaccgccaggacagcatgggcttcatggaccgcaggatggtagac
aatgagctctacacgttcaagagcactggggacattaatacgattagactgtcaggggca
aaccaaatcctagatccagagaccttcgactcgaagggggaggaatccatttag
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