Oncorhynchus tshawytscha (Chinook salmon): 112229974
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Entry
112229974 CDS
T05605
Name
(RefSeq) adhesion G protein-coupled receptor B1
KO
K04596
adhesion G protein-coupled receptor B1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04115
p53 signaling pathway
otw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112229974
09143 Cell growth and death
04115 p53 signaling pathway
112229974
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112229974
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229974
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112229974
Peptidases and inhibitors [BR:
otw01002
]
Mixed peptidases
Family P2
112229974
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Others
112229974
G protein-coupled receptors [BR:
otw04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
112229974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_2
AGRB_N
TSP_1
GAIN
TSP1_spondin
TSP1_ADAMTS
GPS
HRM
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
112229974
NCBI-ProteinID:
XP_024251921
LinkDB
All DBs
Position
LG31:complement(2866116..2895649)
Genome browser
AA seq
1537 aa
AA seq
DB search
MAWPPPRSGPLVALVALLFLGLTSSIPSGPASDTCATLEQSRFFGLFSSTANLPSTPCSW
TLQNPDPRRYTVYMKITKPSDSCLPRQVKTFQFDSFIETSRTYLGMESFDEVVRLCDAST
SVTYLESSKQFLQLRKVAPRHGLEIVEGEGSGEFKAEFLVVGKRNPSMPACQKLCQWLEN
CLSTSTHPNPCGIMNTPCQCWETPVRKPGGCYRGGVYLEQCIPTPRDNGRDIVRDTEIIK
GWNGWGRWSECSMECGGGVQVRSRACHPEDSVCEGVVEEGRACNPQPCIGQVRARSQALA
SIVGLKRENADVPGTGVVAPQTVDAAAVADEWSPWSVCSVSCGEGWQARSRFCVTSSYST
QCTGPLRENRPCNNTMVCPVDGAWDEWSPWSLCSSTCGRGYRDRTRTCKQPQNGGEPCKG
PIKQTKFCNIAVCPVDGAWNEWSGWTTCSASCSNGTKQRTRECNGPSYGGSECRGDWRET
NNCFLKDCPVDGRWLSWSSWGSCSKTCGGGSQQRQRMCEGPYFGGEPCPGERGELRRCNE
KRCPEPHEICQEETDGDVVWKRTPAGDMAAVTCPTDSTGLTLRRCTLGAVGLAYWENPTY
IKCISKNYQDISTLAQDGVDKAKKGLMADGISEVISRLRATSDEGTKYSGDLLSIMDVLR
NTTEIYKGAGYSLSNADVENYAQTISNLLKEEHHDKWEEAQLMGANVKEFLQLVEDFVDM
IGMQMKDFQDIYEVTENLVLSIHKRPTAMTTDFTFPVKGWRGMMDWVRTSEEKITVSRDA
LSIDQSEGTTAFVTGIILYRNLSSILSFQSNSSVLNSKVVTVVVKPTPGLLSTPVEIEFP
HLHNDTINETCISWDESETSSLLGSWSARSCRAVAVDSFRTKCVCDRLSTFAILARLNPD
MNMDKNLLPSVTLIVGCGVSSLTLLLLIIIYVSVWKYIRSERSVILINFCLSIICSNALI
LVGQTQARNKVVCGVVAALLHFFFLSSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGW
GLPALVVAVSVGFTKAKGYGTVNYCWLSLEGGLLYSFVGPAAAVVLVNMVIGILVFNKLV
SKDGITDVKLKERAGASLWSSCVILPLLALTWMSAVLAMTDRRSALFQILFAVFDSLEGF
IIVMVHCILRREVQDAVKCRVVDRKDDGNGDSGSSLQNSHHTQLMSDFEKDADSNRPGGM
NSSCEEKMPLPPQLPLPMSSNFHTLPSHTTKAHMQALPEYSSHTLTLKREKTRLHGGMDP
SSCGKPVYVCEGELFQQLDANLALGQAEGSCPDGSGYLLLPNTTSTLRKAKEDPSKYNIS
VEQLPQTRLVHLSGPFAEPQAAFGLKTLPSDRVSVSYSERDSPVQNIHNMSSESHITHSS
LGDTFDSMNSMMSKSETISTLSMSSLERQKSRYAELDFEKIMHTRKRHQNMFQDLNRKLH
HAEKQDRESPASDSKSVRWSVSSGGSDKTNHSDKQLPQVERPWEGVQRTQHSPPAWVRKD
LEPLAASPLHMQQVEWEKAGATIPMVSQDIIDLQTEV
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggccacctccccggtcggggcccttagtggcccttgtggccctccttttcctc
ggtttgacttccagcatcccgtctggcccggcctctgatacctgtgccaccctggagcag
agccgcttcttcgggctgttctcttcgaccgccaacctgccctccacgccgtgctcctgg
accctgcagaacccagaccctcgccgctacaccgtctacatgaagatcaccaagcccagc
gactcctgcctgccccgccaggtcaaaaccttccagttcgactccttcatcgagacctct
cgcacctacctgggtatggagagctttgatgaagtcgtccgattgtgcgacgcttcaaca
tctgtaacctacctggagtctagcaagcagttcctgcagctccgcaaggtggcgccaaga
cacggcctggagattgtggagggagagggcagcggtgaattcaaggccgagttcctggtg
gtgggcaagaggaaccccagtatgccagcctgtcagaagctgtgccagtggctggagaat
tgtttgtccaccagcactcatcccaacccctgcggcatcatgaacaccccctgccagtgc
tgggagacccccgtcaggaagcccggtggctgctaccgtggaggcgtctacctggaacag
tgcatcccaacccccagagacaatggacgtgacattgtacgtgacaccgaaatcataaag
ggctggaatggttggggccgctggtctgagtgcagtatggagtgcgggggtggagtccag
gtgcgcagccgagcctgtcatccagaggatagtgtgtgtgaaggcgtggtcgaagagggg
cgtgcctgcaaccctcagccctgcattggtcaagtgcgtgcccgtagccaagccctagct
tccattgttggcctgaaaagagagaacgctgatgttcctggcactggagtcgtggcccct
caaacagtggacgctgctgcggttgcagatgagtggtccccctggagtgtgtgttcagtg
agctgtggagagggctggcaggcccgctcccgtttctgtgttacgtcctcctacagcacc
caatgcaccggccccctccgcgagaaccggccctgcaacaacaccatggtctgccccgtt
gatggagcttgggacgagtggtccccatggagcctgtgctcttccacctgcggccgtggt
taccgtgaccgcacccgcacctgcaagcagccccagaacggaggagaaccctgcaaggga
cccatcaaacagaccaagttctgcaacatcgcagtctgcccagtggatggtgcctggaac
gaatggtccggttggaccacctgctccgcctcttgctcgaatggcaccaaacagaggaca
cgtgaatgcaacggaccgtcctacggaggctcggagtgccgtggtgattggcgtgagacc
aacaactgcttcctgaaagattgcccagttgatggacgctggttatcatggagctcatgg
ggaagctgcagcaagacctgtggtggaggaagccagcagagacagaggatgtgcgaagga
ccttactttggtggagagccttgccctggagagagaggagagctgagacgctgcaacgag
aaaagatgcccagaaccccatgagatctgtcaggaggagaccgacggtgatgttgtgtgg
aagagaaccccagcaggagatatggcggccgtgacctgccctacagattccacaggcttg
accttgcgccgatgcacccttggcgctgtaggccttgcttattgggagaatccgacctat
atcaagtgcatctccaagaactaccaggacatttccacattggcccaggatggtgttgat
aaggctaagaagggcttgatggctgatgggatttctgaggtgatctcccgactgagggcc
acctctgatgaggggaccaagtacagcggagacctactgtccatcatggatgtcctcagg
aacaccactgagatctacaaaggagctggatacagcctgagcaatgccgatgtggagaac
tatgcccagacaatcagcaacttactgaaggaggaacatcatgacaaatgggaggaggca
cagctgatgggcgctaacgtcaaggagttcttgcagctcgtcgaggactttgtggacatg
atcggtatgcagatgaaggacttccaggacatttatgaagtcacagagaatttagtgttg
agcatccataaacgccccacagccatgaccaccgacttcaccttcccagtgaaaggatgg
agaggcatgatggactgggtcaggacctcagaggagaagatcaccgtctcccgcgacgct
ctgtccatcgaccagtccgagggcaccactgcatttgtgaccgggatcattctgtacaga
aacctcagctccatcctatccttccaaagtaacagcagcgtactcaactcgaaggtagtt
acggttgtggtcaagcccaccccaggtctgctctccaccccagtggaaatcgagttcccc
cacctccataatgacaccatcaatgaaacgtgcatctcctgggatgagagtgaaacttct
tcgctgcttggatcttggtctgcgcgtagctgcagagcagtcgccgttgattctttcaga
accaaatgcgtctgtgacaggctctccaccttcgccattttagcgcggctgaaccctgat
atgaacatggataagaatcttcttccctctgtgacgctcatcgtgggctgtggggtctcc
tctctcaccctactgctcctcatcatcatctatgtctccgtctggaagtatatccgctcg
gagcgctcggtgatcctcatcaacttctgcctctccattatctgctccaatgccctcatt
ctggttggacaaacccaagcccgcaacaaggtggtgtgtggagtggtggccgccctcctt
cacttcttcttcctctcatctttctgctgggtgctgacggaagcatggcagtcctacatg
gctgtcacgggccgtctgcgcaaccgcatcatccgcaagcgtttcctctgcttgggctgg
ggactccctgctctggtggtggctgtgtctgttggatttaccaaggctaagggatatggc
accgtcaactactgctggctctctctggagggtggactcctctactcgtttgttgggccc
gctgctgctgttgttctggtgaacatggtaattggcatcctggtcttcaacaaactggtg
tccaaggacggcatcaccgatgtcaaactgaaggagcgagcgggagcgtcactgtggagc
tcctgtgtgattctgcccctgctggccctcacctggatgtccgctgtcctggccatgacc
gaccgccgctccgctctcttccagatcctctttgcggtctttgactccctggaagggttc
ataatcgtcatggtgcactgcatcctgcgtagagaggttcaagatgcagtgaaatgcaga
gttgttgaccgtaaggacgatggcaatggagattctggcagttccctccaaaatagccac
cacacccagctcatgtctgatttcgaaaaggacgctgactccaacagacctggtggcatg
aactcctcctgtgaggagaagatgcccctcccacctcagctacccctccccatgagctcc
aacttccacaccctgccctcccacaccaccaaggctcacatgcaggccttgcccgagtac
tccagccacaccctcaccctgaagagggagaagacccggctgcatggtggcatggacccg
tcctcctgcgggaaacccgtctacgtgtgcgaaggcgagctcttccagcagctggacgcc
aacctggcgcttggccaggcggaggggagctgccccgacggtagcggctacttgctcctg
cccaacaccacctccacccttcgcaaggccaaagaggacccgtccaagtacaacatcagc
gtggagcagcttccacagaccaggctggttcatctcagtgggccgttcgctgagccccag
gctgccttcggactcaagacgctaccgtccgaccgggtcagcgtgtcctactcggagagg
gactctcctgtccagaacatccacaacatgtccagcgagtctcacatcacccacagcagc
ctgggagacaccttcgactcaatgaactccatgatgtccaagagcgagaccatctccaca
ctgtccatgagctccctggagagacagaagtcccgttacgctgaattagatttcgagaag
ataatgcacacaaggaaacgtcaccaaaacatgttccaggacctcaacaggaaattacat
cacgctgagaaacaagacagagagtcccctgcttcagacagcaagtctgtgagatggagt
gtgtcctctggaggaagtgacaaaacaaaccacagcgacaagcaactgccacaggtggag
agaccctgggaaggtgtccagaggacccagcactcgccccccgcctgggtgcggaaggac
ctggagcccctggccgcatcgcccctgcatatgcagcaggtggagtgggagaaggctgga
gccaccatcccaatggtcagccaggacatcatcgacctgcagacggaggtctga
DBGET
integrated database retrieval system
