Oncorhynchus tshawytscha (Chinook salmon): 112229975
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Entry
112229975 CDS
T05605
Name
(RefSeq) GATOR complex protein MIOS
KO
K20407
SEA/GATOR complex protein SEA4/MIOS
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112229975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112229975
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
112229975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIOS_WD40
MIOS_a-sol
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
112229975
NCBI-ProteinID:
XP_024251926
LinkDB
All DBs
Position
LG03:20742547..20752753
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AA seq
878 aa
AA seq
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MSGSKPDILWSLHHADRYVICDSELGLYRIGPVGSGETKAGALPLSEETAATLLAINSDT
PYMKCVAWYPKHEPECLLAVGQANGRVVLTSLGQSHNSKCKELMGKEFVPKHARQCNTLA
WNPVDSNWLAAGLDKHRADFSVLIWDISSKFSPEASVATEKIRLSSGDTDSGLVVTKPLY
ELGQNDACLSLCWLPRDQKLLLAGMHRNLAIFDLRNTSQKTFVNTKAIQGVTVDPHFPDR
VASFFEGQVAIWDLRKFEKPVLTLTEQPKPLTKVAWCPTRMGLLATLTRDSNIIRLYDMQ
HTPTPIGDETEPTIIERSVQPSNSLIGSFAWHPTSQNRMVVVSAANRTMTDFTVFERISL
AWSSTTSLMWACGRHLYECAEEGGVGGEGTVEKDIATKMRQRAQSRYGHDTVQVWKNHLL
AGGDDPQLKSLWYTLFFMKQYTEDMEQKQQGNKQALVYSGIKNIVKSSSGTTENRRCWSG
SDRQTDVPRFHSEERSLALRLCGWINRGPDINVEPFLRSLEGEGEWERAAAVALFNLDIR
RAIQILNKGASAERGDLNLNVVAMALSGYTDEKSSLWREMCSSLRLQLKNPYLCVMFAFL
TSEPGTYDGVLYESSVAVTDRVAFACMFLNDTQLPRYMEKLTSEMKEVGNLEGILLTGLT
KDGVDLMESYVDRTGDVQTASFCMLKGSPGEVVKDPRVQCWIENYRNLLDAWRFWHKRAE
FDIHRSKLDPSSKPLAQVFVSCNFCGKSISYSCSAMPHQGRGFSQYGVSGSPTKSKVTSC
PGCRKPLPRCALCLMNMGTPVSNCPGTGKSDEKVDLTRENKLAQFNNWFTWCHNCRHGGH
AGHILSWFRDHTECPVSTCTCKCMQLDTTGNLVPSDSH
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctcaaagccagacattctgtggtctctccaccacgccgaccgctatgtcatc
tgtgactcagagcttggactgtaccgcatcggacctgtggggagcggcgagaccaaagcc
ggagctctccccctctctgaggagaccgctgctaccctattagcgatcaactctgacacc
ccctacatgaaatgtgtggcctggtacccaaagcacgagcctgaatgtctgctagcagtt
ggacaggctaacggtagggtcgtcctcactagcctaggccagagccacaactccaagtgc
aaggagctaatggggaaagagtttgtgcccaagcatgcacgtcaatgcaacaccctagcc
tggaaccctgtagacagcaactggctagccgccgggctggacaagcacagagcagacttc
tcagtgctcatatgggacattagcagtaagttctccccagaggctagtgtagccaccgaa
aagatccgtctctcgtcaggagacacagactctggcctagtggtgaccaaacccctgtat
gagctaggccagaacgatgcttgcctgtccctctgctggctgccccgtgaccagaagctg
ctcttggctggcatgcaccgcaacctggccatcttcgacctgcgcaacaccagccagaaa
accttcgtcaataccaaggccatccagggtgtgacagtggacccccacttcccagaccgt
gtggcctccttctttgagggccaggtggccatctgggacctccgcaagtttgagaagcca
gtgctcacgcttaccgagcagcccaagccgctcaccaaggtggcctggtgccccacacgt
atgggcctgttggccacgctgacacgcgacagcaacatcatccgcctttacgacatgcag
catacgcccacgcccatcggtgatgagacagagcccacaatcattgagcgcagcgtgcag
cccagcaacagcctcattggcagcttcgcctggcaccccacttctcagaaccgcatggtg
gtggtttcggcagccaatcgcaccatgaccgacttcactgtgttcgaacgtatctcttta
gcctggagctccaccacttcgctcatgtgggcctgcggcagacacctctatgagtgtgct
gaggaggggggcgtgggaggggagggtactgtagagaaggacatagccactaagatgagg
cagagggcccagtccaggtacggtcatgatacggtccaggtgtggaagaaccatttgctg
gccggaggggatgacccccagctcaagtccctgtggtacactctgttcttcatgaagcag
tacactgaagacatggagcagaaacagcaggggaacaaacaggccctggtctattcaggc
atcaagaacatagtcaagtccagctcaggcactacagagaaccgacggtgctggagcggc
tcagaccgccagacggacgtccccaggttccacagcgaggagcgcagccttgccctgcgt
ctgtgtggctggatcaaccgaggccctgacatcaacgtggagcccttcctgcgctccctg
gagggggagggggagtgggagcgtgcggccgccgtggccctcttcaacctggacatccgt
agggccatccagatcctcaacaagggagcctccgctgagagaggggacctgaacctaaac
gtggttgctatggcgttgtcaggttacacggacgagaagagttccctgtggcgggagatg
tgcagctctctaaggctgcaactcaagaacccctacctgtgtgtcatgtttgccttcctc
accagtgagcctggcacatacgacggagtactgtatgagagtagtgtggctgtaacggac
cgagtggccttcgcatgcatgttcctaaacgacacacagctgcctcgctacatggagaag
ttgaccagtgagatgaaggaggtggggaacctggaggggatcctgctgacggggctgacc
aaagacggagtggacctgatggagagctacgtggaccggaccggagacgtccagactgcc
agcttctgcatgctcaagggttccccaggggaggtggtgaaggacccgcgtgtccagtgc
tggatcgagaactaccgtaacctgctggacgcatggaggttctggcacaaacgggctgag
tttgacatccacaggagcaagctggaccccagttccaaaccactggcacaggtgtttgtg
agttgtaacttctgtgggaagtccatatcgtacagctgctcggccatgccccaccagggc
cgcggcttcagccagtacggggtcagcggctcgcccaccaagtcaaaggtcaccagctgc
cccggctgcaggaagcccctcccccgttgtgcgctctgcctcatgaacatgggcacgcct
gtgtccaactgcccaggcacggggaagtcagacgagaaggtggatctgaccagggagaac
aaactggcccagttcaacaactggttcacctggtgccacaactgccgccatggcggccat
gcaggtcacatactcagctggtttagggaccatacagagtgtccagtgtcgacctgcacc
tgtaagtgcatgcagctggacaccacaggaaacctggtgccttcagacagccactag
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