Oncorhynchus tshawytscha (Chinook salmon): 112229999
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Entry
112229999 CDS
T05605
Name
(RefSeq) ephrin-A1
KO
K05462
ephrin-A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112229999
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112229999
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112229999
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112229999
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Growth factors (RTK binding)
112229999
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Axon guidance molecules
112229999
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Others
112229999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
SMIM5_18_22
Motif
Other DBs
NCBI-GeneID:
112229999
NCBI-ProteinID:
XP_024251967
UniProt:
A0A8C8JWH8
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Position
LG31:complement(330908..354193)
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AA seq
225 aa
AA seq
DB search
MDLVWSLCFVGSLGAWFASAERHSIYWNNTNSKFLRDSYAVEVRLNDYLDIVCPHYPLGE
VASQDAERYVLYMVEREDYDACKPQSYDQMRWECGHPFAPHAAEKFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLRVDVVATDGSQEARVATGGAAAVPGAEDGAHNPSN
RLPADDPVVILPEVQKSVRTNSSVSKASFSILSLFVPVLLLLLLQ
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtctggagcctgtgcttcgttgggagtctcggcgcttggtttgcttctgcc
gaaaggcacagcatatattggaataacacaaacagcaagttcctaagggacagctatgcg
gtggaggtgcgtctgaacgactacctggacatcgtgtgcccccactacccgctgggcgag
gtggcatcgcaggatgctgagcgctacgtgctctacatggtggagcgggaggactacgac
gcttgcaagcctcagtcctacgaccagatgcgttgggagtgcggccaccccttcgccccc
cacgctgctgagaagttctccgagaagttccagcgtttcacccccttcaccctgggcaag
gagttccgccagggagagagctactactatatctccaaacctctgcaccaccacggacag
gagtgcctcaggctcagggtagacgtcgtagctactgatggttctcaagaggccagggtt
gcaactggaggagctgcagctgtacctggagctgaggatggagcacacaacccttccaac
aggctgcctgcagatgacccagtggtaatcctgccagaggtccagaaaagtgtgcggaca
aattcgtcggtgtcaaaggcgtccttctccatcctgtcattgtttgtcccagtcttatta
ttgctgctgttacagtga
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