Oncorhynchus tshawytscha (Chinook salmon): 112230207
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Entry
112230207 CDS
T05605
Symbol
gga1
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112230207 (gga1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230207 (gga1)
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
GGA
112230207 (gga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
Mac
Maestro_HEAT
Ferritin
Hrs_helical
Luteo_P1-P2
PCRF
LMBR1
Motif
Other DBs
NCBI-GeneID:
112230207
NCBI-ProteinID:
XP_024252161
LinkDB
All DBs
Position
LG32:complement(16800689..16809181)
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AA seq
650 aa
AA seq
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MAAPPEEESLESRVNKATNPLNKEADWDSIQGFCEQLNNEPEGPQLATRLLAHKIQSPQE
WEAMQSLMVLEMCMKNCGKRFHNEVGKFRFLNELIKVVSPKYLGTRAPEPVKKKVLEVMF
SWTVGLPDEPKIADAYQMLKKQGIVKQDPVLPDEPLPPPPPRTKSVIFEDEEKSKMLSRL
LNSTHPEDLRAANKLIKEMVQEDQKRMEKVSKRVNAIQEVKESVGLLTQLLGDYSKESSS
QSNQELIKDLYQSCEKMRPTLFRLASDTEDNDEALADILQANDSLTQVINLYRQLVKGEE
VTGDSTAMPTLPGSSTALLDLTGLDTSPTGLPSYPDTPSLQTPSQELGISLLDDELMSLG
LNDVTPNSTHTPQSGDWNSFQCSDSVEPVVPAVPTATVLLPAVTPIPQAPSGGAPAASPK
ALDELDLLGKTLLHQSLPPGTQHVNWDKLQPQSRPTLRDLQTKSSTNTTSTSTPSPVLAF
PSEQPGSLLDSLPSLGPPTPAPQNDISLANVTVPLESIKPSSLLPVTVFDKHSLRVLFHF
ARDSPPSRPDVLVVIISMLSSAPIPVTNIRFQSAVPKVMKVKLQPPSGTELPAFNPILPP
AAITQVLLLANPHKEMVRLRYKLTFDLGEESHDESGDVEQFPPPDTWGNL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgccagaggaggagagcttggagtctcgcgtcaacaaagccaccaaccct
ctgaacaaggaggcggactgggacagtatccagggcttctgtgaacagctcaacaatgag
cctgaaggtcctcaactggctaccagacttttggcccacaagatccagtcaccccaagaa
tgggaggccatgcaatcactaatggttctagagatgtgcatgaagaactgtgggaagagg
ttccacaatgaagtgggcaaattccgcttcctcaacgagctcatcaaggtggtctcaccc
aagtacctgggtactcgggccccagagccagtgaagaagaaggttctggaggtgatgttc
agttggacggtgggtctgcctgacgagcccaagatagcagacgcctaccagatgctgaag
aaacaaggcattgttaagcaggacccggtacttcctgatgagcccctcccaccccctcca
cccagaactaagagcgtcatctttgaggatgaggagaagtccaagatgctgtctcggctt
ttgaatagcactcaccctgaagatctaagagcagcaaacaaactcattaaggaaatggtg
caggaggaccagaagcgaatggagaaggtgtctaagcgtgtgaacgccatccaggaggtg
aaggagagtgtgggcctgctgacccagctactgggagactatagcaaggagagcagctcc
cagagcaatcaggaactcatcaaggacctataccagagctgtgaaaagatgaggcctact
ttgttccgattggctagcgacacagaggacaacgatgaggccttggctgacatcctgcag
gccaacgacagcctgactcaggtcatcaacctgtacagacagctggtgaagggagaagag
gtgaccggagacagcacagccatgcccacactaccaggaagtagcacagccctcctagac
ctgacagggttagacacctcgcccactggacttccctcctacccagacaccccctcacta
cagaccccgtcacaagaactgggtatcagcctgctagatgatgagctcatgtcactagga
ctcaatgacgtaacgcccaactctacccacactcctcagtcgggagactggaactccttt
cagtgttctgacagtgtagagccagtcgtcccagcggtgcctactgcaacagtgttgcta
ccggccgtgacccctatcccccaggctccatcagggggggcccccgctgcttcccctaaa
gccctggatgagttagacctgctgggcaagaccctgctgcatcagtccctacccccgggg
acgcagcacgtaaattgggataaactgcagccccagtccagacccaccctgcgagacctc
cagaccaagtccagtaccaacactactagcacctctacccccagccctgtcctggccttt
ccctcggagcagcctgggtctctcctagactccctgcccagcctcgggcctcctacccca
gccccccagaatgacatctccttagctaacgtgactgtgcccctggaatcaatcaagccc
agcagcttgttaccagtgactgtatttgacaagcacagtttgcgggtgctgttccacttt
gcccgtgactctcctccctctcggcctgacgtgctggtagtgatcatctccatgttgtcc
tccgcccccataccagtcaccaacatccgcttccagtctgcagtacccaaggtgatgaag
gtgaagctacagcctccttcaggaactgagcttccagccttcaaccccatcttaccccca
gccgccatcacacaggtcctactgctggccaatcctcacaaggagatggtccggttgcga
tacaagctcacatttgacctgggagaagaatcacatgacgaatccggcgatgtagaacag
ttcccccctccagatacctgggggaacctttag
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integrated database retrieval system
