Oncorhynchus tshawytscha (Chinook salmon): 112230211
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Entry
112230211 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid type B receptor subunit 1 isoform X1
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112230211
04082 Neuroactive ligand signaling
112230211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112230211
G protein-coupled receptors [BR:
otw04030
]
Metabotropic glutamate receptor family
GABA
112230211
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
Peripla_BP_6
Sushi
DUF6377
NEMP
DUF3995
DP
Pox_P21
Motif
Other DBs
NCBI-GeneID:
112230211
NCBI-ProteinID:
XP_024252167
UniProt:
A0A8C8LRU6
LinkDB
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Position
LG23:9690724..9743663
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AA seq
998 aa
AA seq
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MAQLLFLIILYALPSLVVAIHNSTTGGCAIIRPPRDGGIRYRGLTQEQIRNVQILPVDYE
IEYICRGNRVIVGPKVRKCLPNGTWTDITQHSRCLLLCPRVWTSLENGRVALKPPGPPVE
GTVLHYSCHAGFMLEGRNITHCTKLGKWDSPKPVCLYDRNYKGKKKLYIGALFPMSGGWP
GGQACLPSAQMALDLVNNRTDILPDYELELIYYDSMCDPGESTKLLYDLLYTEPIKTVLM
PGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRNRFPTFFRTHPSATLHNPTRVRLFQK
WKWTKIATIQQTTEVFTSTLDDLEQRVKEAGIEISVRQSFLTDPAVAVKNLKRQDARIIV
GLFYETEARKVFCEVFKEKLYGKKYVWFLIGWYADNWFKIKDPSINCTIENMTEAVEGHV
TTEIVMLNPETVRGASNLTSQEFLGALMNRLGGKNPEETGGFQEAPLAYDAVWALALALN
KTVAPLKAKGRRLEDFNYNNHDITAEIYRALNTSSFEGVSGHVVFDAQGSRMAMTLIEQL
QGGSYKKIGYYDSSQKNLSWFGNDVWIGAGPPADSTIVIEEFRYLSQKLFAAVSVFAGLG
ILLGIVCLTFNIYNSNVRYIQNSQPYLNNMTAVGCMMALAAVFPLGIDGHHIHRSQFPVV
CQFRLWLLGLGFSLAYGSMFTKIWWVHNLFTKKEEKKEKRKHLEPWKLYATVGVLLAIDV
LSLMIWQIVDPLHITVEKFTREAPKGDLDVLIQPLLEHCTSEKMNTWLGVVYGYKGLLLL
LGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCMITAPVTMILTSQQDASFAFAALAIV
FSVYITLVVLFVPKMRRLITRGEWQSEQQDTLKTGSSTNNNDEEKSRQLERENRELQKII
QEKEQRVSELRNQLVERQALRNRRRPSSGTNQNHSNPSPPSSQPDPKSLLPPPGYPNPAS
DNHSSLPPSFSNSSNLYQADSKISRNHCHNSQIPLLYK
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctattgtttcttataattctgtatgctctgccatctcttgttgtggccata
cataattcaacaactggaggctgtgccatcatccgtcctcccagagatggaggcatccgc
tacagaggcctgacacaagaacagattcgcaatgtgcagatcctaccagtggactacgag
atagagtacatctgcagggggaacagggtcatagtgggccctaaggtcaggaagtgcctt
cccaacggcacatggactgatatcacacagcacagcaggtgtctgctgctgtgccctcgt
gtgtggacgtccctggagaatgggagggtggcgctgaagccccctgggccaccggtggag
ggcaccgtgctgcactacagctgccatgctggcttcatgctggagggcaggaacatcaca
cactgcaccaagctgggcaagtgggactcacccaaaccggtctgcctctatgacagaaac
tacaaaggcaagaagaaactctacatcggagctctcttccccatgagcggcggttggccg
ggcggccaagcatgtctcccctctgcgcagatggctttggatctggtaaacaaccggacg
gatattctgccggattacgaactggagctgatatactatgacagtatgtgtgacccaggg
gagtccaccaagttgctctatgatctgctctacacagagcccatcaagacagtcctgatg
cccggctgcagctccgtatccacactggtagcagaggctgctcgcatgtggaacctcata
gtgttgtcctatggctccagctctcctgccttgtccaacaggaaccgcttccccaccttc
ttccgcacccacccctcggccaccctccacaaccccaccagggtacgcctcttccagaag
tggaagtggacaaagatcgctaccatccagcagaccacagaggtcttcacttcgactctg
gatgatctggagcagagggtgaaggaggctgggattgagatcagtgtgagacagagcttc
ctcaccgacccggctgtcgctgtcaagaacctcaagcgtcaggatgccagaataattgtg
gggctcttctatgagacggaagccaggaaagtgttttgcgaggtatttaaggagaaactg
tatgggaagaaatatgtgtggtttctgattggttggtacgctgataactggttcaagatc
aaagacccgtccatcaactgcaccatcgagaacatgacagaggcggtggagggccacgtt
accacggagatcgtcatgctcaaccccgagaccgtccgcggagcctccaacctgacctct
caggagttcctgggggcgttgatgaaccggctggggggtaagaacccggaagagacaggg
ggcttccaggaggcccctctggcctacgacgctgtctgggccctggccctggccctcaac
aagactgtggcccctctgaaggccaaaggccgcaggctggaggacttcaactacaacaac
catgacatcacagcagagatctaccgcgccctcaacaccagctcatttgaaggcgtgtct
ggccatgtggtgtttgatgcccagggttccaggatggcgatgacccttattgagcaactg
caaggaggcagttataagaagattggatactacgacagctctcagaagaatctctcctgg
tttggcaatgatgtgtggataggtgccgggcccccggctgactcgacaatagtcattgag
gagtttaggtacctctctcagaagctgtttgctgctgtgtctgtcttcgctggtctgggc
atcctgctgggcatcgtctgtctgaccttcaacatctacaacagcaacgtccggtacatc
cagaactcccagccctacctgaacaacatgacggcagtgggttgtatgatggccctggct
gctgtgtttcccctggggatcgatggacaccacatccacaggtcccagttccctgtggtc
tgtcagttccgtctgtggctgctcggcctgggcttcagtctggcatatggcagcatgttc
accaagatttggtgggtacacaatctcttcacaaagaaggaggagaagaaggagaagagg
aagcacctggagccatggaaactctatgcaacagttggagtgttactagccatagacgtc
ctgtcactcatgatttggcagattgtggatcctttacacatcacagtagagaagttcact
agggaggcccctaaaggagacttggatgtcctgattcagcccctcctggagcactgcacc
tcagagaagatgaacacatggctcggtgtagtgtatggctacaagggactactgctgttg
ctggggatatttctagcctacgagaccaagtctgtttccacggagaagatcaatgaccat
cgagccgtggggatggctatttacaacgtggctgtgttgtgcatgatcacggctcccgtc
actatgatcctcacgtcacagcaggatgcttcctttgcctttgccgcgttggccatagtg
ttctctgtctacatcacgctggtggtgctctttgtgcccaagatgcgcaggctgatcacg
cgtggtgagtggcagtcggagcagcaggacacgctgaagaccggctcgtccaccaacaac
aacgacgaggagaagtctcgccagctggagagagagaaccgtgagctgcagaagatcata
caggagaaagagcagagggtatcggagctccgcaaccagctggttgagagacaggccctg
cgcaaccgacgacggccctcatccggcaccaatcagaaccacagcaacccgtccccgccc
tcttcccagccagaccccaagtctctcctgcccccacccggttaccccaaccccgcatcg
gacaatcactcctccttacccccctccttctccaactcctccaacctgtaccaggcggac
agcaagataagtcgcaaccactgtcacaacagccagatccccctgctctacaagtga
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