Oncorhynchus tshawytscha (Chinook salmon): 112230242
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Entry
112230242 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec23B
KO
K14006
protein transport protein SEC23
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112230242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230242
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112230242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
APP_E2
Motif
Other DBs
NCBI-GeneID:
112230242
NCBI-ProteinID:
XP_042173573
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MATYQEFIQQNEDRDGVRFSWNLWPSSRLEATRLVVPVSCLFTPLKERPDLPPVQYEPVL
CSRANCKAVLNPLCQVDYRAKIWACNFCFQRNPFPPSYAGISDVNQPAELMPQFSTIEYI
VQRGPPNPLIFLYVVDTCLEEEDLQALKESLQMSLSLLPPNALVGLITFGRMVQVHELSC
EGIAKSYVFRGTKELSSKQIQEMLGLTNPAASGPQGRPAAPQDPAVTCRFLQPVHKVDMN
LTDLLGELQRDPWPVPQGKRPLRSTGIALSIAVGLLEGTFPNTGARVMMFMGGPPTQGPG
MVVGDELKTPIRSWHDITKDNARHLKKATKYYDALANRAAVNGHSIDIYACALDQTGLLE
MKCLSNLTGGHIAMGDSFNTSLFKQTFQRVFSKDHNGEFRMAFGGTLEVKASRELKVSGA
IGPCVSLNAKGPCISENEVGVGGTTQWKICSLSPSTTLALYFEVVNQHNAPIPQGGRGAV
QFVTQYQHSNTQRRIRVTTVARNWADAQSQIQHIESSFDQEASAVIMARLGVFRAESEEG
PDVLRWLDRQLIRLCQKFGQFNKDDPTSFKLSESLSLYPQFMFHLRRSPFLQVFNNSPDE
CSYYRHHFVRQDLTQSLIMIQPILYSYSFHGPPEVRLLPNVCFLLKMLTNSFFQLVIYHG
EXTIAQWRKAGYQEQPEYENFKHLLVAPVDDAQEILQTRFPMPRYIDTEHGGSQARFLLS
KVNPSQTHNNLYSWGQETGAPILTDDVSLQVFMDHLKKLAVSSAT
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcgacataccaggagtttatccaacagaatgaggatcgggacggcgtgcgttttagc
tggaacctgtggccctcgagcaggctggaagctacccggctggtagtgcctgtctcctgc
ctcttcaccccactcaaggagaggccagacctgccaccggtgcagtacgaaccagtcctc
tgtagcagggccaactgcaaggctgtactaaacccgctatgccaagttgactacagagcc
aaaatatgggcgtgcaacttctgcttccaaagaaacccattccccccgtcatacgctggc
atctcggacgttaaccagccggctgagctcatgccacagttctcaaccattgagtacata
gtgcagcgcggccccccgaaccccctcatcttcctgtacgtggtggacacgtgtctggag
gaggaggacctgcaggccctgaaggagtccctgcagatgtccctgtccctgctgcccccc
aacgccctggtcggcctcatcaccttcggacgcatggtgcaggtccacgagctgagctgc
gagggcattgcaaagagctacgtgttcagaggaaccaaggagctttcctccaaacagatc
caggagatgctaggcctgacgaacccagcggcatctgggcctcagggtcgtcccgcggcc
cctcaggatccagccgtcacctgtcggttcctgcagccggtccataaggtagacatgaac
ctgacagacctgttgggagagttgcagagagacccctggcctgtaccacaggggaagaga
ccactgcggtctactggaatagcactgtccatcgccgtgggcctgctggagggtacgttt
cccaacacaggggcccgtgtgatgatgttcatgggcggaccccccacccagggccccggg
atggtggtgggagacgaactcaagacccccatccgctcctggcatgacatcaccaaggac
aacgcacggcatctgaagaaagccaccaagtactacgacgccttggcgaaccgtgcggca
gtgaacggccacagtattgacatctacgcctgtgccttggatcagaccggacttctagag
atgaaatgtttatccaacctcactggaggtcacatagcgatgggcgactccttcaacacc
tctctgttcaagcagaccttccagagggtgttcagtaaggaccacaacggagagttccgc
atggccttcggaggcacgctggaagtcaaggcgtccagggagctgaaggtatcgggggcc
atcgggccctgtgtctccctcaacgctaagggaccgtgtatatcagagaacgaggtcggt
gttggaggaacaacccagtggaaaatctgcagtctcagtccctccacgacgttggccttg
tacttcgaggtcgtcaatcagcacaacgccccaatccctcagggtggtagaggagcggtc
cagtttgtcacccagtaccaacactccaacacccagaggaggatcagggttaccaccgtc
gccaggaattgggccgacgcccagtcccagatccagcacattgagtcgtccttcgaccag
gaggcgtcggcggtcatcatggccaggctgggcgtgttcagggccgagtcggaagagggg
ccggacgtcctgcgctggctggacagacagctcattcgcctgtgtcagaaattcggtcag
ttcaacaaagatgaccccacctcattcaagctctcggagtccctctcactctacccacag
tttatgttccacctgcggcggtcaccgttcctgcaggtgttcaacaacagcccagatgag
tgttcctactacagacaccactttgtccgccaggacctgacccagtctctcatcatgatc
cagcccatcctgtactcttactcgttccacggaccaccagaggtcagactcttaccaaat
gtttgttttctcctcaaaatgctgacaaacagcttcttccagctggtcatctaccatgga
gaatgaaccatcgcccagtggcgtaaggcgggttaccaggagcagccggagtacgagaac
ttcaagcatctactggtagcacccgtggatgacgcccaggagatcctgcagacccggttc
cccatgccccggtacatcgacacagagcacggagggtcccaggcccgcttcctcctgtcc
aaggtcaacccctcccagacacacaacaacctctactcctggggacaggagaccggagcc
cccatcctcacagacgacgtgagtctacaggtgttcatggaccacttgaagaagctggcc
gtgtcgagcgccacttaa
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