Oncorhynchus tshawytscha (Chinook salmon): 112230275
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Entry
112230275 CDS
T05605
Name
(RefSeq) syntaxin-8 isoform X1
KO
K08501
syntaxin 8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112230275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112230275
Membrane trafficking [BR:
otw04131
]
SNARE
SNAP-25[C] (Qc)
STX8
112230275
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNARE
HMMR_C
Prominin
Spc29
pAdhesive_10
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
112230275
NCBI-ProteinID:
XP_024252272
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Position
LG32:12058937..12109522
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AA seq
263 aa
AA seq
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MSQDPWLQNYDATCRLVQEIAENIHERNRQQRTRGNPAKMNMTLRASLQKLKQNINQLRE
SLLRVSSSRRMYPSFHHMITGPPGHVTDDTQHSAPNRMQSEADRRQNLVDDLVTRDKQLN
ATFKGDVTQPEPSRSTLMAGAEAEGGAAVNPWLVHEPEETRGLGFSAIKQQQQHIIEVQD
AGLDALAAVISRQKLMGQDIGNELDEQNEIIDDLTHLVDKTDDRIRNETRRVKLVETKSA
SCGMLVVIVLLLIAIVVVAVWPT
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagatccctggttacagaattatgatgccacttgccgccttgttcaagaaatt
gcagagaacattcatgaaagaaacagacaacagaggacaagagggaatcctgcaaagatg
aacatgacactgcgagcgtcgctacagaagctgaaacagaacatcaaccagctcagagag
agtttgctccgagtctcgtcctcccggcgcatgtatccttcctttcaccacatgatcact
ggtcctcctggtcatgtgactgatgacacgcagcacagtgccccaaaccgaatgcagtcg
gaagccgatcggagacagaaccttgttgacgacctggtcaccagggacaagcagctaaat
gccacgttcaagggtgacgttacacagccagagccctcgaggtcgaccctgatggctggg
gcggaggcagaagggggggccgcggtcaacccctggctggtccacgagccagaggagacc
aggggcctgggcttctccgcaatcaaacagcaacagcagcacatcatcgaagttcaggat
gctgggttggatgcgttagccgccgtcatcagccgacagaagctgatgggtcaggatata
ggcaacgagctggacgaacagaatgaaatcatcgatgacctcacccacctggtggacaag
acggatgaccggatccgcaacgagacaagaagggttaagctggtggagactaagtcggct
tcctgcgggatgctggtggtgatcgtgctcctgctcattgctatagtggtggttgctgtg
tggcccacataa
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